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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • endoplasmic reticulum 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, plasma membrane
MultiLoc:endoplasmic reticulum
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G044500.1 Wheat plasma membrane 92.62 90.22
TraesCS3D01G036400.1 Wheat plasma membrane 92.62 90.22
TraesCS3B01G039300.1 Wheat plasma membrane 91.8 90.14
Os10t0195000-01 Rice golgi, mitochondrion, plasma membrane, vacuole 75.82 79.74
Zm00001d030250_P001 Maize peroxisome 68.65 64.18
OQU92001 Sorghum peroxisome 67.42 62.31
HORVU4Hr1G011690.1 Barley plasma membrane 65.37 61.23
KXG38740 Sorghum plasma membrane 61.27 58.74
GSMUA_Achr9P26370_001 Banana plasma membrane 53.28 55.79
HORVU2Hr1G117540.1 Barley plasma membrane 54.51 55.65
GSMUA_Achr5P01870_001 Banana plasma membrane 51.23 52.97
HORVU3Hr1G074290.9 Barley nucleus, peroxisome, plasma membrane 54.1 52.91
Solyc10g051130.1.1 Tomato plasma membrane 47.75 48.74
PGSC0003DMT400021339 Potato peroxisome, plasma membrane, vacuole 47.34 48.33
VIT_18s0001g11760.t01 Wine grape plasma membrane 45.7 46.56
Solyc01g109320.2.1 Tomato peroxisome 46.31 45.47
Solyc01g109310.2.1 Tomato plasma membrane 44.26 45.38
PGSC0003DMT400064838 Potato plasma membrane 44.06 45.17
CDY17070 Canola cytosol, peroxisome, plasma membrane 44.06 44.42
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 43.85 44.21
CDY06731 Canola cytosol, peroxisome, plasma membrane 43.85 44.21
AT1G47530.1 Thale cress cytosol, peroxisome, plasma membrane 43.65 44.01
KRH05771 Soybean cytosol, plasma membrane, vacuole 43.24 43.69
KRH15267 Soybean cytosol, plasma membrane, vacuole 43.03 43.48
HORVU6Hr1G091840.1 Barley plasma membrane 42.42 41.24
HORVU6Hr1G091850.2 Barley peroxisome, plasma membrane, vacuole 42.21 40.47
HORVU2Hr1G046420.16 Barley plasma membrane 40.57 40.08
HORVU4Hr1G078230.1 Barley cytosol, peroxisome, plasma membrane 40.37 39.88
HORVU0Hr1G022320.1 Barley plasma membrane 38.52 38.84
HORVU5Hr1G069900.5 Barley golgi 40.16 38.28
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 39.75 38.19
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 40.16 38.13
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 39.75 37.6
HORVU7Hr1G027270.10 Barley mitochondrion, peroxisome, vacuole 40.16 37.48
HORVU5Hr1G045360.3 Barley cytosol, peroxisome, plasma membrane 37.09 35.7
HORVU5Hr1G086830.4 Barley cytosol, peroxisome, plasma membrane 36.48 35.25
HORVU7Hr1G049240.3 Barley peroxisome 38.32 33.82
HORVU5Hr1G008770.1 Barley plasma membrane 34.84 33.66
HORVU0Hr1G010460.2 Barley cytosol 5.12 23.58
Protein Annotations
EnsemblPlants:HORVU3Hr1G014320.2EnsemblPlantsGene:HORVU3Hr1G014320GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF174PFAM:PF01554SEG:seg
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000B47E760UniProt:A0A287K6H4MapMan:24.2.4.1.1:
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A287K6H4]
Coordinates
chrchr3H:+:32696869..32699191
Molecular Weight (calculated)
52133.4 Da
IEP (calculated)
8.990
GRAVY (calculated)
0.687
Length
488 amino acids
Sequence
(BLAST)
001: MRALATKSWE ESKLLWRLAF PAVLTEVFQF SIGFVTASFV GHIGVVELAA VTIVEGVLEG FAYGVLFGMG CALDTLCGQA VGAGQLGLLG VYVQQSWIVC
101: GAAAVALTPA YALATPILGS LLRQPAAVAA AAGPYARWAI PRLLAHAANF PLQKFFQTQS RVWALAAITG AALAVHVALT YVAVNRLGYG LRGAAVAGNV
201: SYWLIDAAQF AYLVSGRFPD AWKGFSVRAL RNLAAFVKLS LVSAAMICLE FWYYAALLIL VGLLKNGQLQ LDIMSVCINY EFWTMMVALG FSEAVSVRVS
301: NELGGSRPKD AKFAVAVAAM TSALIGATFM AVFFIWRRGL PRLFSDDKDV VQGAARLGYL LAVTVFFSSI GPVLSGVAVG AGWQLQVAFV NIGCYYLVGI
401: PVGVLLGFKH RLGALGVWTG MLTGTLLQMA ILLLIIKRTG WEKQAQLAAA RIKEVGGKNE DQPLTTTACT EDDHMKNIEL DCKEQAVV
Best Arabidopsis Sequence Match ( AT1G12950.1 )
(BLAST)
001: MEKDNDFKDP FLASTEEEEL DPATQKALME YLGVGSRASS LVSFSSTAVD IPPISGVGDF VREFRIESRK LWKLAGPAIF TTMSQYSLGA VTQVFAGHIS
101: TLALAAVSIE NSVIAGFSFG IMLGMGSALE TLCGQAFGAG KVSMLGVYLQ RSWVILSVTA LFLSLIYIFA APILTFIGQT AAISAMAGIF SIYMIPQIFA
201: YAINFPTAKF LQSQSKIMVM AGISGVVLVI HSFFTWLVMS RLHWGLPGLA LVLNTSWWVI VVAQLVYIFN CTCGEAWSGF TWEAFHNLWG FVKLSLASAA
301: MLCLEIWYFM ALVLFAGYLK NAEVSVAALS ICMNILGWAA MVAFGTNAAV SVRVSNELGA SHPRTAKFSL VVAVILSTAI GMFIAAGLLF FRNEYPVLFV
401: EDEEVRNVVR ELTPMLAFCI VINNVQPVLS GVAVGAGWQA VVAYVNIACY YLFGVPFGLL LGFKLEYGVM GIWWGMVTGT FVQSIVLTWM ICKTNWEKEA
501: SMAEERIKEW GGVPAEKETL LN
Arabidopsis Description
DTX31Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178WCP4]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.