Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G076010.1 | |
| HORVU3Hr1G026980.2 | |
| HORVU3Hr1G071060.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G21690.1 | HORVU1Hr1G076010.1 | AT3G16310.1 | 21798944 |
| AT3G21690.1 | HORVU3Hr1G026980.2 | AT3G16310.1 | 21798944 |
| AT3G21690.1 | HORVU3Hr1G071060.1 | AT3G16310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G326600.1 | Wheat | cytosol, peroxisome, plasma membrane | 96.46 | 95.7 |
| TraesCS5D01G332300.1 | Wheat | cytosol, peroxisome, plasma membrane | 95.87 | 95.68 |
| Os03t0571900-01 | Rice | plasma membrane | 85.24 | 83.27 |
| Zm00001d033062_P001 | Maize | cytosol, plasma membrane, plastid | 83.46 | 82.65 |
| KXG38133 | Sorghum | cytosol, peroxisome, vacuole | 83.27 | 81.98 |
| TraesCS5A01G326300.4 | Wheat | cytosol, plasma membrane, vacuole | 89.17 | 79.47 |
| CDY33131 | Canola | golgi, plasma membrane, vacuole | 25.59 | 73.86 |
| KRH26788 | Soybean | plasma membrane | 70.67 | 71.23 |
| KRH56125 | Soybean | plasma membrane | 72.24 | 70.99 |
| Bra001840.1-P | Field mustard | plasma membrane | 63.78 | 70.9 |
| Solyc07g052380.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 69.88 | 70.58 |
| CDX92916 | Canola | cytosol, plasma membrane, vacuole | 69.49 | 69.9 |
| VIT_12s0059g02180.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 69.69 | 69.82 |
| VIT_12s0059g02220.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 69.09 | 69.23 |
| PGSC0003DMT400065544 | Potato | cytosol, peroxisome, plasma membrane | 65.94 | 69.21 |
| Bra031297.1-P | Field mustard | cytosol, peroxisome, vacuole | 67.91 | 69.14 |
| CDY33129 | Canola | cytosol, peroxisome, plasma membrane | 68.7 | 69.11 |
| Bra031296.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 68.7 | 69.11 |
| AT3G21690.1 | Thale cress | cytosol, peroxisome, plasma membrane | 68.7 | 68.97 |
| CDY24250 | Canola | cytosol, peroxisome, plasma membrane | 42.72 | 68.45 |
| CDY38631 | Canola | cytosol, peroxisome, vacuole | 68.9 | 68.36 |
| HORVU3Hr1G110460.3 | Barley | cytosol, peroxisome | 69.29 | 68.22 |
| Bra023866.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 65.35 | 68.17 |
| CDY69153 | Canola | cytosol, peroxisome, plasma membrane | 42.52 | 68.14 |
| CDY39494 | Canola | cytosol, peroxisome, plasma membrane | 68.9 | 68.09 |
| Solyc12g005850.1.1 | Tomato | plasma membrane | 68.5 | 67.97 |
| VIT_12s0059g02160.t01 | Wine grape | plasma membrane | 68.9 | 67.96 |
| CDY19294 | Canola | cytosol, peroxisome, plasma membrane | 68.7 | 67.9 |
| KRH25385 | Soybean | plasma membrane | 58.07 | 66.89 |
| CDY39493 | Canola | cytosol, peroxisome, plasma membrane | 66.14 | 66.8 |
| CDY65669 | Canola | cytosol, peroxisome, plasma membrane | 64.76 | 66.46 |
| CDY33130 | Canola | cytosol, peroxisome, vacuole | 40.16 | 66.23 |
| HORVU1Hr1G007910.1 | Barley | peroxisome, plasma membrane | 66.14 | 65.37 |
| Bra023867.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 63.98 | 65.0 |
| CDY19295 | Canola | cytosol, peroxisome, plasma membrane | 38.39 | 64.14 |
| HORVU2Hr1G046420.16 | Barley | plasma membrane | 61.42 | 63.16 |
| PGSC0003DMT400022543 | Potato | plasma membrane | 64.76 | 62.79 |
| VIT_12s0059g02230.t01 | Wine grape | cytosol, nucleus, plasma membrane | 65.94 | 48.69 |
| HORVU4Hr1G078230.1 | Barley | cytosol, peroxisome, plasma membrane | 42.13 | 43.32 |
| HORVU5Hr1G008770.1 | Barley | plasma membrane | 42.13 | 42.38 |
| HORVU3Hr1G074290.9 | Barley | nucleus, peroxisome, plasma membrane | 41.34 | 42.08 |
| HORVU6Hr1G091840.1 | Barley | plasma membrane | 41.34 | 41.83 |
| HORVU5Hr1G045360.3 | Barley | cytosol, peroxisome, plasma membrane | 41.73 | 41.81 |
| HORVU6Hr1G091850.2 | Barley | peroxisome, plasma membrane, vacuole | 41.34 | 41.26 |
| HORVU7Hr1G027270.10 | Barley | mitochondrion, peroxisome, vacuole | 41.73 | 40.54 |
| HORVU4Hr1G011690.1 | Barley | plasma membrane | 40.94 | 39.92 |
| HORVU5Hr1G086830.4 | Barley | cytosol, peroxisome, plasma membrane | 39.57 | 39.8 |
| HORVU3Hr1G014320.2 | Barley | plasma membrane | 38.19 | 39.75 |
| HORVU5Hr1G069900.5 | Barley | golgi | 39.96 | 39.65 |
| HORVU0Hr1G022320.1 | Barley | plasma membrane | 36.61 | 38.43 |
| HORVU2Hr1G117540.1 | Barley | plasma membrane | 33.27 | 35.36 |
| HORVU7Hr1G049240.3 | Barley | peroxisome | 38.39 | 35.26 |
| HORVU0Hr1G010460.2 | Barley | cytosol | 5.31 | 25.47 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G082890.5 | EnsemblPlantsGene:HORVU5Hr1G082890 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | InterPro:MATE_fam | PANTHER:PTHR11206 | PANTHER:PTHR11206:SF200 | PFAM:PF01554 | SEG:seg |
| TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI000B46C4B3 | UniProt:A0A287S1J7 | MapMan:24.2.4.1.1 | : |
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A287S1J7]
Coordinates
chrchr5H:-:568575948..568581220
Molecular Weight (calculated)
54501.7 Da
IEP (calculated)
7.729
GRAVY (calculated)
0.755
Length
508 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSKLQTPLL PPPAGSEGGG DDGHGSSKRL ESILSDESVP WARRMLAATA VEMRMLVRLA APAVLVYMIN YLMSMSTQIF AGHLGTLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGANKFDML GIYMQRSTVL LMATGIPLAV LYAFSRPILI LLGESPEIAR AAAIFVYGLI PQIFAYAANF PIQKFMQAQS
201: IMAPSAYISA GTLAIHLVLS YLVVYKFGLG LLGSSLMLSI SWWVIVIGQF IYIVTSSRCR LTWTGFSLQA FSGLPEFFKL SLASAIMLCL ETWYFQILVL
301: IAGLLKDPEM ALASLSVCMT ISGWVFMISV GFNAAASVRV SNELGAGNPK SAAFSVVVVT VLSFILAGII SIVILFFRDY ISYIYTGGDD VAAAVSKLTP
401: LLALTLILNG IQPVLSGVAV GCGWQAFVAY VNVGCYYVVG IPLGCLLGFY FDLGAAGIWS GMIGGTFMQT VILVWVTVRT DWNKEVGEAR KRLHKWEGNK
501: APLLAGQE
101: VFAYGLMLGM GSAVETLCGQ AYGANKFDML GIYMQRSTVL LMATGIPLAV LYAFSRPILI LLGESPEIAR AAAIFVYGLI PQIFAYAANF PIQKFMQAQS
201: IMAPSAYISA GTLAIHLVLS YLVVYKFGLG LLGSSLMLSI SWWVIVIGQF IYIVTSSRCR LTWTGFSLQA FSGLPEFFKL SLASAIMLCL ETWYFQILVL
301: IAGLLKDPEM ALASLSVCMT ISGWVFMISV GFNAAASVRV SNELGAGNPK SAAFSVVVVT VLSFILAGII SIVILFFRDY ISYIYTGGDD VAAAVSKLTP
401: LLALTLILNG IQPVLSGVAV GCGWQAFVAY VNVGCYYVVG IPLGCLLGFY FDLGAAGIWS GMIGGTFMQT VILVWVTVRT DWNKEVGEAR KRLHKWEGNK
501: APLLAGQE
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.