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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • plastid 1
  • vacuole 2
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:plastid
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra027174.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 Bra027174.1-P AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39493 Canola cytosol, peroxisome, plasma membrane 95.0 94.43
CDY65669 Canola cytosol, peroxisome, plasma membrane 92.2 93.13
Bra001840.1-P Field mustard plasma membrane 80.0 87.53
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 86.4 85.54
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 85.2 84.19
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 81.6 83.78
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 83.2 83.37
GSMUA_Achr6P00360_001 Banana vacuole 60.4 74.2
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 72.0 71.57
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 69.2 71.49
KRH26788 Soybean plasma membrane 71.4 70.83
Solyc12g005850.1.1 Tomato plasma membrane 71.2 69.53
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 71.6 68.71
KRH56125 Soybean plasma membrane 70.8 68.47
KXG37120 Sorghum plasma membrane 68.8 68.12
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 69.0 68.05
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 69.0 68.05
Zm00001d013809_P002 Maize plasma membrane 67.0 67.4
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 66.8 67.2
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 66.0 67.07
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 66.0 67.07
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 66.0 66.94
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 66.4 66.94
Os03t0572900-01 Rice plasma membrane 66.8 66.8
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 66.4 66.67
EER91319 Sorghum cytosol, peroxisome, plasma membrane 67.0 66.6
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 66.2 66.6
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 66.2 66.6
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 66.4 66.53
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 66.2 66.33
GSMUA_Achr9P11610_001 Banana plasma membrane 65.6 66.26
Zm00001d033063_P001 Maize vacuole 66.0 66.0
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 65.8 65.93
KXG38133 Sorghum cytosol, peroxisome, vacuole 68.0 65.89
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 67.6 65.89
KRH25385 Soybean plasma membrane 58.0 65.76
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 65.8 65.67
TraesCS3D01G506100.1 Wheat plasma membrane 65.4 65.66
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 65.4 65.53
TraesCS3A01G499200.1 Wheat plasma membrane 65.2 65.46
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 66.6 65.42
TraesCS3B01G562400.2 Wheat plasma membrane 65.0 65.26
Os03t0571900-01 Rice plasma membrane 67.8 65.19
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 66.6 65.04
PGSC0003DMT400022543 Potato plasma membrane 68.0 64.89
VIT_12s0059g02160.t01 Wine grape plasma membrane 66.8 64.85
EER91321 Sorghum plasma membrane 64.8 64.67
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 64.4 64.4
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 66.2 64.15
Zm00001d021629_P003 Maize plasma membrane 65.8 64.13
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 65.0 63.98
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 67.4 63.83
TraesCS4B01G388800.1 Wheat plasma membrane 63.0 63.13
TraesCS5A01G553200.1 Wheat plasma membrane 62.8 62.93
TraesCSU01G124400.1 Wheat plasma membrane, plastid 62.8 62.8
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 64.4 62.77
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 63.2 62.45
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 64.0 62.38
GSMUA_Achr4P23760_001 Banana plasma membrane 57.2 62.17
EER93896 Sorghum cytosol, peroxisome, plasma membrane 65.0 62.02
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 45.8 61.89
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 63.6 61.87
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 63.2 61.72
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 61.2 61.69
TraesCS2B01G247700.2 Wheat plasma membrane 60.8 61.66
HORVU2Hr1G046420.16 Barley plasma membrane 60.8 61.54
TraesCS2A01G222300.1 Wheat plasma membrane 60.6 61.46
TraesCS2D01G228200.1 Wheat plasma membrane 60.6 61.46
Bra027073.1-P Field mustard cytosol, plasma membrane, vacuole 61.0 60.88
Bra031776.1-P Field mustard plasma membrane 59.8 60.65
Bra028379.1-P Field mustard plasma membrane 60.0 59.88
Bra016823.1-P Field mustard plasma membrane 37.6 59.49
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 58.6 59.43
TraesCS3B01G485100.1 Wheat plasma membrane 65.4 59.35
Bra038747.1-P Field mustard plasma membrane 42.0 57.69
Zm00001d006493_P001 Maize plasma membrane 65.6 57.54
Bra038748.1-P Field mustard cytosol, peroxisome, plasma membrane 55.6 56.5
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 57.4 56.27
Bra020862.1-P Field mustard plasma membrane 56.4 56.18
Bra020863.1-P Field mustard plasma membrane 56.4 55.62
Bra038749.1-P Field mustard peroxisome, plasma membrane, vacuole 56.2 55.42
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 62.6 54.91
Zm00001d006494_P004 Maize plasma membrane 60.6 53.44
Bra025214.1-P Field mustard plasma membrane 41.4 49.4
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 66.0 47.97
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 45.0 46.49
Bra003361.1-P Field mustard plasma membrane 46.6 45.96
Bra040003.1-P Field mustard plasma membrane 32.4 44.75
Bra037814.1-P Field mustard plasma membrane 43.2 44.72
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 42.0 44.4
Bra024381.1-P Field mustard plasma membrane 42.6 44.01
Bra040000.1-P Field mustard plasma membrane 34.4 42.89
Bra009034.1-P Field mustard plasma membrane 36.8 42.89
Bra026945.1-P Field mustard cytosol, peroxisome, vacuole 40.2 42.68
Bra006059.1-P Field mustard plasma membrane 41.4 42.51
Bra013906.1-P Field mustard plasma membrane 40.0 40.9
Bra040001.1-P Field mustard plasma membrane 40.2 40.77
Bra035477.1-P Field mustard peroxisome, plasma membrane, vacuole 40.2 40.69
Bra019147.1-P Field mustard plasma membrane 39.2 40.16
Bra028589.1-P Field mustard peroxisome 32.0 38.55
Bra037335.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 39.0 38.01
Bra006058.1-P Field mustard plasma membrane 39.8 37.83
Bra024379.1-P Field mustard plasma membrane 42.6 37.5
Bra010453.1-P Field mustard plasma membrane 35.0 35.86
Bra036449.1-P Field mustard plasma membrane 35.2 35.34
Bra031982.1-P Field mustard plasma membrane 35.2 35.27
Bra023633.1-P Field mustard plasma membrane 33.4 34.86
Bra013957.1-P Field mustard plasma membrane 34.4 34.61
Bra013572.1-P Field mustard golgi 54.0 26.32
Protein Annotations
MapMan:24.2.4.1.1EnsemblPlantsGene:Bra023867EnsemblPlants:Bra023867.1EnsemblPlants:Bra023867.1-PGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297
GO:GO:0016020GO:GO:0016021GO:GO:0055085UniProt:M4E513InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF188TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002544539SEG:seg
Description
AT3G21690 (E=6e-208) | MATE efflux family protein
Coordinates
chrA01:-:20588781..20595936
Molecular Weight (calculated)
54500.2 Da
IEP (calculated)
4.588
GRAVY (calculated)
0.790
Length
500 amino acids
Sequence
(BLAST)
001: MDSAQTDGVY QPLLQPDQLS PLPESNNCEL ERVLADVETP LFLRLRKATM IETKLLFKLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNRGIQ
101: VFAYGLMLGM GSAVETLCGQ AFGGRKYEML GVYLQRSIVL LTLTGVLLTS IYVFSENILL FLGQSPEIAS AASLFVYGLL PQIFAYAVNF PIQKFLQSQS
201: IVAPSAYIST ATLFIHLLLS WLAINQLEIG LLGASLVLSL SWWIIVAAQC VYIVTSERCR ETWGGFSVQA FSGLPSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSVCLT IAGWAFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITSVIL AIIVWLCRDV LSYAFTEGEE VSAAVSDLCP
401: FLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPIGTLFGFY FEYDAKARYL SCFYFGIWTG MIGGTLIQTV ILVWVILRTD WTKEVSTLNF
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.