Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G222300.1 | Wheat | plasma membrane | 99.19 | 99.19 |
| TraesCS2B01G247700.2 | Wheat | plasma membrane | 99.19 | 99.19 |
| HORVU2Hr1G046420.16 | Barley | plasma membrane | 93.51 | 93.32 |
| EER97294 | Sorghum | endoplasmic reticulum, peroxisome, plasma membrane | 88.64 | 88.1 |
| Os07t0516600-01 | Rice | endoplasmic reticulum, peroxisome, plasma membrane | 86.0 | 86.0 |
| Zm00001d006494_P004 | Maize | plasma membrane | 87.63 | 76.19 |
| TraesCS3D01G506200.1 | Wheat | cytosol, plasma membrane, vacuole | 67.95 | 68.09 |
| TraesCS3D01G506500.3 | Wheat | cytosol, peroxisome, plasma membrane | 67.95 | 67.13 |
| TraesCS3D01G506100.1 | Wheat | plasma membrane | 67.55 | 66.87 |
| TraesCS3D01G506700.1 | Wheat | cytosol, peroxisome, plasma membrane | 67.14 | 66.47 |
| KRH26788 | Soybean | plasma membrane | 66.94 | 65.48 |
| CDY33131 | Canola | golgi, plasma membrane, vacuole | 22.92 | 64.2 |
| TraesCS5D01G332300.1 | Wheat | cytosol, peroxisome, plasma membrane | 65.72 | 63.65 |
| VIT_12s0059g02180.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 65.31 | 63.51 |
| AT3G21690.1 | Thale cress | cytosol, peroxisome, plasma membrane | 65.11 | 63.44 |
| Solyc07g052380.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 64.71 | 63.42 |
| PGSC0003DMT400065544 | Potato | cytosol, peroxisome, plasma membrane | 61.66 | 62.81 |
| CDY24250 | Canola | cytosol, peroxisome, plasma membrane | 40.37 | 62.78 |
| CDY33129 | Canola | cytosol, peroxisome, plasma membrane | 64.1 | 62.57 |
| VIT_12s0059g02220.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 64.3 | 62.52 |
| Bra031296.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 63.89 | 62.38 |
| Bra001840.1-P | Field mustard | plasma membrane | 57.81 | 62.36 |
| CDY65669 | Canola | cytosol, peroxisome, plasma membrane | 62.47 | 62.22 |
| CDX92916 | Canola | cytosol, plasma membrane, vacuole | 63.69 | 62.18 |
| VIT_12s0059g02160.t01 | Wine grape | plasma membrane | 64.71 | 61.94 |
| CDY39493 | Canola | cytosol, peroxisome, plasma membrane | 63.08 | 61.83 |
| Bra031297.1-P | Field mustard | cytosol, peroxisome, vacuole | 62.47 | 61.72 |
| Solyc12g005850.1.1 | Tomato | plasma membrane | 63.89 | 61.52 |
| CDY69153 | Canola | cytosol, peroxisome, plasma membrane | 39.55 | 61.51 |
| CDY39494 | Canola | cytosol, peroxisome, plasma membrane | 63.89 | 61.28 |
| Bra023866.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 60.45 | 61.19 |
| KRH56125 | Soybean | plasma membrane | 64.1 | 61.12 |
| CDY33130 | Canola | cytosol, peroxisome, vacuole | 37.93 | 60.71 |
| Bra023867.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 61.46 | 60.6 |
| CDY38631 | Canola | cytosol, peroxisome, vacuole | 62.88 | 60.55 |
| CDY19294 | Canola | cytosol, peroxisome, plasma membrane | 63.08 | 60.51 |
| TraesCS1D01G030400.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.07 | 59.77 |
| CDY19295 | Canola | cytosol, peroxisome, plasma membrane | 36.31 | 58.88 |
| KRH25385 | Soybean | plasma membrane | 49.9 | 55.78 |
| PGSC0003DMT400022543 | Potato | plasma membrane | 59.23 | 55.73 |
| TraesCS7D01G240600.1 | Wheat | plasma membrane | 45.84 | 47.18 |
| TraesCS5D01G254500.1 | Wheat | mitochondrion, plasma membrane | 29.41 | 46.93 |
| TraesCS7D01G469000.1 | Wheat | plasma membrane | 44.83 | 46.33 |
| TraesCS7D01G130800.1 | Wheat | plasma membrane | 44.62 | 46.22 |
| TraesCS7D01G130700.1 | Wheat | plasma membrane | 44.62 | 46.22 |
| TraesCS5D01G360400.1 | Wheat | peroxisome, plasma membrane, vacuole | 45.84 | 44.93 |
| TraesCS4D01G068800.1 | Wheat | plasma membrane | 43.0 | 44.63 |
| TraesCS7D01G014200.1 | Wheat | golgi, nucleus, plasma membrane | 43.0 | 44.54 |
| TraesCS3D01G301400.1 | Wheat | golgi, nucleus, plasma membrane | 42.8 | 44.51 |
| TraesCS5D01G041700.1 | Wheat | plasma membrane | 45.23 | 44.51 |
| TraesCS4D01G302500.1 | Wheat | cytosol, peroxisome, plasma membrane | 44.62 | 44.44 |
| VIT_12s0059g02230.t01 | Wine grape | cytosol, nucleus, plasma membrane | 61.66 | 44.19 |
| TraesCS7D01G384100.1 | Wheat | golgi, plasma membrane, vacuole | 41.78 | 43.37 |
| TraesCS4D01G068900.1 | Wheat | plasma membrane | 41.58 | 43.34 |
| TraesCS7D01G272900.1 | Wheat | plasma membrane | 44.02 | 43.14 |
| TraesCS5D01G254400.1 | Wheat | plasma membrane | 40.97 | 42.89 |
| TraesCS6D01G384300.1 | Wheat | plasma membrane | 44.02 | 42.8 |
| TraesCS7D01G129700.1 | Wheat | plasma membrane | 40.57 | 41.58 |
| TraesCS5D01G150100.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.38 | 40.4 |
| TraesCS5D01G355500.1 | Wheat | plasma membrane | 40.97 | 40.32 |
| TraesCS4D01G123800.1 | Wheat | plasma membrane | 40.57 | 40.16 |
| TraesCS3D01G036400.1 | Wheat | plasma membrane | 40.57 | 39.92 |
| TraesCS6D01G384400.1 | Wheat | plastid | 43.2 | 38.24 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G228200.1 | EnsemblPlantsGene:TraesCS2D01G228200 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:MATE_fam | ncoils:Coil | PANTHER:PTHR11206 | PANTHER:PTHR11206:SF201 | PFAM:PF01554 | SEG:seg |
| TIGR:cd13132 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | MapMan:24.2.4.1.1 | : | : |
Description
No Description!
Coordinates
chr2D:-:196856349..196860475
Molecular Weight (calculated)
52209.7 Da
IEP (calculated)
7.643
GRAVY (calculated)
0.775
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPGDHAGVR SADGRLEALL SGGGGARRMA SAAALELRLL APLAAPAVVV YMLIIVMSSA TQIFCGQLGN VQLAAASLGN NGIQVFAYGL MLGMGSAVET
101: LCGQAYGAEK YEMLGVYLQR STVLLMATGV PLAAMYAFSE PILLLLGQSP EIAGAAAEFA YGLIPQIFAY AANFPIQKFL QAQSIVAPSA YILTASMALL
201: VAMSWVAVYR LGLGLLGASL TLSLTWWVLV AGQFAYIVLS PRCRETWTGF TWAAFADLAG FAKLSAASAV MLALEVWYFQ VLILLAGMLP DPQIALDSLT
301: VCTSIQSWVF MISVGFNAAA SVRVGNELGA GNPRSAAFSA WVVTAMSALI AVLAGVLVFL LRHKLSYIFT GGEAVSRAVA DLCPLLVGTI VLCGIQPVLS
401: GVAVGCGWQA LVAYINIGCY YFIGVPLGAL LGFKFDYGIK GLWGGMIGGT LIQTIILLWI TFRTDWNKEV EEARRRLDKW DDAKQPLLAN VQR
101: LCGQAYGAEK YEMLGVYLQR STVLLMATGV PLAAMYAFSE PILLLLGQSP EIAGAAAEFA YGLIPQIFAY AANFPIQKFL QAQSIVAPSA YILTASMALL
201: VAMSWVAVYR LGLGLLGASL TLSLTWWVLV AGQFAYIVLS PRCRETWTGF TWAAFADLAG FAKLSAASAV MLALEVWYFQ VLILLAGMLP DPQIALDSLT
301: VCTSIQSWVF MISVGFNAAA SVRVGNELGA GNPRSAAFSA WVVTAMSALI AVLAGVLVFL LRHKLSYIFT GGEAVSRAVA DLCPLLVGTI VLCGIQPVLS
401: GVAVGCGWQA LVAYINIGCY YFIGVPLGAL LGFKFDYGIK GLWGGMIGGT LIQTIILLWI TFRTDWNKEV EEARRRLDKW DDAKQPLLAN VQR
001: MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ
Arabidopsis Description
DTX36Protein DETOXIFICATION 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB0]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.