Factsheet for Zm00001d021629_P003

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

plasma membrane: 23508561
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008871_P001
Zm00001d010783_P001
Zm00001d038803_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21690.1	Zm00001d008871_P001	AT3G16310.1	21798944
AT3G21690.1	Zm00001d010783_P001	AT3G16310.1	21798944
AT3G21690.1	Zm00001d038803_P001	AT3G16310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37120	Sorghum	plasma membrane	81.68	82.97
Zm00001d006493_P001	Maize	plasma membrane	90.64	81.58
TraesCSU01G124400.1	Wheat	plasma membrane, plastid	73.88	75.8
TraesCS4B01G388800.1	Wheat	plasma membrane	73.29	75.35
TraesCS5A01G553200.1	Wheat	plasma membrane	73.1	75.15
HORVU1Hr1G007910.1	Barley	peroxisome, plasma membrane	73.88	73.74
Zm00001d013809_P002	Maize	plasma membrane	69.59	71.83
Zm00001d033061_P002	Maize	cytosol, plasma membrane, vacuole	69.01	71.81
KRH26788	Soybean	plasma membrane	69.4	70.63
VIT_12s0059g02180.t01	Wine grape	cytosol, peroxisome, plasma membrane	69.4	70.22
VIT_12s0059g02220.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	69.2	70.02
Zm00001d033063_P001	Maize	vacuole	68.23	70.0
Solyc07g052380.2.1	Tomato	cytosol, peroxisome, plasma membrane	68.42	69.78
Zm00001d033062_P001	Maize	cytosol, plasma membrane, plastid	69.59	69.59
Zm00001d013811_P001	Maize	cytosol, peroxisome, plasma membrane	68.62	69.57
PGSC0003DMT400065544	Potato	cytosol, peroxisome, plasma membrane	65.5	69.42
Bra001840.1-P	Field mustard	plasma membrane	61.79	69.37
CDY33131	Canola	golgi, plasma membrane, vacuole	23.78	69.32
Zm00001d013810_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	71.34	69.32
AT3G21690.1	Thale cress	cytosol, peroxisome, plasma membrane	68.23	69.17
CDY69153	Canola	cytosol, peroxisome, plasma membrane	42.69	69.09
CDY24250	Canola	cytosol, peroxisome, plasma membrane	42.69	69.09
Bra031297.1-P	Field mustard	cytosol, peroxisome, vacuole	66.28	68.14
Solyc12g005850.1.1	Tomato	plasma membrane	67.84	67.97
CDY33129	Canola	cytosol, peroxisome, plasma membrane	66.86	67.92
KRH56125	Soybean	plasma membrane	68.42	67.89
Bra031296.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.67	67.72
VIT_12s0059g02160.t01	Wine grape	plasma membrane	67.84	67.57
CDY33130	Canola	cytosol, peroxisome, vacuole	40.55	67.53
CDX92916	Canola	cytosol, plasma membrane, vacuole	66.47	67.52
CDY38631	Canola	cytosol, peroxisome, vacuole	67.25	67.38
CDY65669	Canola	cytosol, peroxisome, plasma membrane	64.91	67.27
CDY39493	Canola	cytosol, peroxisome, plasma membrane	65.69	67.0
Bra023866.1-P	Field mustard	cytosol, peroxisome, plasma membrane	63.16	66.53
CDY39494	Canola	cytosol, peroxisome, plasma membrane	66.28	66.15
CDY19294	Canola	cytosol, peroxisome, plasma membrane	66.08	65.95
Bra023867.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.13	65.8
CDY19295	Canola	cytosol, peroxisome, plasma membrane	38.4	64.8
KRH25385	Soybean	plasma membrane	54.19	63.04
PGSC0003DMT400022543	Potato	plasma membrane	63.74	62.4
Zm00001d006494_P004	Maize	plasma membrane	64.52	58.38
VIT_12s0059g02230.t01	Wine grape	cytosol, nucleus, plasma membrane	66.47	49.56
Zm00001d050457_P002	Maize	plasma membrane	41.72	44.31
Zm00001d012663_P001	Maize	mitochondrion	43.86	44.03
Zm00001d027982_P002	Maize	cytosol, peroxisome, plasma membrane	41.33	43.62
Zm00001d033296_P002	Maize	plasma membrane	41.33	42.83
Zm00001d005018_P001	Maize	cytosol, peroxisome, plasma membrane	43.27	42.69
Zm00001d053234_P001	Maize	peroxisome	41.52	42.09
Zm00001d023277_P001	Maize	cytosol, peroxisome, plasma membrane	42.88	41.28
Zm00001d030250_P001	Maize	peroxisome	38.99	38.31
Zm00001d049910_P001	Maize	cytosol, peroxisome, plasma membrane	38.01	32.77
Zm00001d051886_P001	Maize	cytosol, peroxisome, plasma membrane	40.94	30.35

Protein Annotations

EntrezGene:100281401	MapMan:24.2.4.1.1	UniProt:B4G210	EMBL:BT043398	ncoils:Coil	EMBL:EU956600
EMBL:EU965144	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:MATE_fam	ProteinID:ONM57732.1	PFAM:PF01554	PANTHER:PTHR11206	PANTHER:PTHR11206:SF200	TIGRFAMs:TIGR00797
TMHMM:TMhelix	UniParc:UPI00017B7D52	EnsemblPlantsGene:Zm00001d021629	EnsemblPlants:Zm00001d021629_P003	EnsemblPlants:Zm00001d021629_T003	SEG:seg

Description

Protein DETOXIFICATION 40

Coordinates

chr7:+:158563702..158567974

Molecular Weight (calculated)

54835.3 Da

IEP (calculated)

7.258

GRAVY (calculated)

0.642

Length

513 amino acids

Sequence
(BLAST)

001: MDSTTTAPLL QPSAASSKEG PGPAPAQHGE GSRELEAILA DASKPWAWRA WEGARLELPL LLRVALPAVA VYMINFVMSM STQIFCGQLG NLELAASSLG
101: NTGIQPLAYG LMLGMGSAVE TLCGQAYGAH KHRMLGVYLQ RSTVLLMATA VPLTVVYAFS ERILVLLGES ERISRAAAVF VYGLIPQIFA YAANFPIQKF
201: LQAQSIVAPS AYISVATLAL HLGLSWVAVY RLGLGLLGGS LVLSFSWWVI VAAQFGYIVT SARCRDTWTG FTTQAFSGLG TFFKLSAASA VMLCLETWYF
301: QIIVLIAGLL KNPELSLDSL SICMNVNAWV FMISVGFNAA ASVRVGNELG AGNPRAAAFS VFMVTSLSFI AATVCAVVVL CLRDQLSYFF TGGEAVARAV
401: SDLCPLLAAT LVLNGIQPVL SGVAVGCGWQ AFVAYVNVGC YYVVGVPLGV FLGFYLDLGA KGVWSGMVIG GTLTQTLILL WVTVRTDWNK EVENAKARLD
501: KWDDKKQPLL VED

Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)

001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE

Arabidopsis Description

DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.