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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane, peroxisome, mitochondrion

Predictor Summary:
  • mitochondrion 2
  • cytosol 1
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, peroxisome, secretory
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d008871_P001
Zm00001d010783_P001
Zm00001d038803_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 Zm00001d008871_P001 AT3G16310.1 21798944
AT3G21690.1 Zm00001d010783_P001 AT3G16310.1 21798944
AT3G21690.1 Zm00001d038803_P001 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 84.66 87.13
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 69.51 74.44
CDY33131 Canola golgi, plasma membrane, vacuole 24.81 74.43
Zm00001d033063_P001 Maize vacuole 70.08 74.0
Zm00001d013809_P002 Maize plasma membrane 69.13 73.44
Bra001840.1-P Field mustard plasma membrane 62.69 72.43
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 68.37 71.49
KRH26788 Soybean plasma membrane 68.18 71.43
Zm00001d021629_P003 Maize plasma membrane 69.32 71.34
CDX92916 Canola cytosol, plasma membrane, vacuole 68.18 71.29
CDY33129 Canola cytosol, peroxisome, plasma membrane 68.18 71.29
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 68.18 71.15
CDY69153 Canola cytosol, peroxisome, plasma membrane 42.61 70.98
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 67.99 70.95
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 66.86 70.74
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 67.8 70.61
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 67.61 70.41
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 67.05 70.38
CDY24250 Canola cytosol, peroxisome, plasma membrane 42.23 70.35
KRH56125 Soybean plasma membrane 68.56 70.02
CDY38631 Canola cytosol, peroxisome, vacuole 67.8 69.92
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 63.64 69.42
CDY39494 Canola cytosol, peroxisome, plasma membrane 67.23 69.07
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 63.64 68.99
CDY65669 Canola cytosol, peroxisome, plasma membrane 64.58 68.89
CDY39493 Canola cytosol, peroxisome, plasma membrane 65.53 68.79
CDY19294 Canola cytosol, peroxisome, plasma membrane 66.86 68.68
Solyc12g005850.1.1 Tomato plasma membrane 66.29 68.36
CDY33130 Canola cytosol, peroxisome, vacuole 39.58 67.86
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 63.83 67.4
VIT_12s0059g02160.t01 Wine grape plasma membrane 65.34 66.99
CDY19295 Canola cytosol, peroxisome, plasma membrane 38.07 66.12
KRH25385 Soybean plasma membrane 54.92 65.76
Zm00001d006493_P001 Maize plasma membrane 68.56 63.51
PGSC0003DMT400022543 Potato plasma membrane 61.36 61.83
Zm00001d006494_P004 Maize plasma membrane 64.02 59.61
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 64.39 49.42
Zm00001d027982_P002 Maize cytosol, peroxisome, plasma membrane 42.61 46.3
Zm00001d053234_P001 Maize peroxisome 42.99 44.86
Zm00001d050457_P002 Maize plasma membrane 40.15 43.89
Zm00001d012663_P001 Maize mitochondrion 42.42 43.84
Zm00001d033296_P002 Maize plasma membrane 40.53 43.23
Zm00001d005018_P001 Maize cytosol, peroxisome, plasma membrane 41.48 42.12
Zm00001d023277_P001 Maize cytosol, peroxisome, plasma membrane 40.91 40.53
Zm00001d030250_P001 Maize peroxisome 37.5 37.93
Zm00001d049910_P001 Maize cytosol, peroxisome, plasma membrane 39.58 35.13
Zm00001d051886_P001 Maize cytosol, peroxisome, plasma membrane 42.61 32.51
Protein Annotations
MapMan:24.2.4.1.1UniProt:A0A1D6GMC9ProteinID:AQK64439.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020
GO:GO:0016021GO:GO:0055085InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF200
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0008425110EnsemblPlantsGene:Zm00001d013810EnsemblPlants:Zm00001d013810_P001EnsemblPlants:Zm00001d013810_T001
SEG:seg:::::
Description
multidrug and toxic compound extrusion2 multidrug and toxic compound extrusion2
Coordinates
chr5:+:21182817..21186548
Molecular Weight (calculated)
56275.2 Da
IEP (calculated)
7.683
GRAVY (calculated)
0.678
Length
528 amino acids
Sequence
(BLAST)
001: MPRPSQQTRN IYTRTMGSAG GGGESKLESP LLGASSTGHG EAVVSGQLES ILGDASVPWG TRMASASAVE MRLLVRLAAP AVLVYMINYL MSMSTQIFSG
101: HLGTLELAAA SLGNTGIQVF AYGLMLGMGS AVETLCGQAY GAHKYDMLGI YLQRSTVLLM ATGVPLAALY AFSRPVLVLL GESPEIASAA AVFVYGLVPQ
201: IFAYAANFPI QKFMQAQSIM GPSAYISAAA LAAHLALSYL VVYRLGLGLL GASLTLSASW WAIVAAQFAY IVTSSRCRLT WRGFSWQAFS GLPSFFRLSL
301: ASAVMLCLET WYFQILVLIA GLLKDPELAL ASLSVCMTIS GWVFMISVGF NAAASVRVSN ELGAGNPRAA AFSVVVVTLL SFVLSVLVSA VILLCRDYIS
401: YIFTEGEDVS QAVSRLTPLL AFTLILNGIQ LQPVLSGVAV GCGWQAFVAY VNVGCYYIVG IPLGCLLGFY FDLGAAGIWS GMIGGTLMQT LILIWVTFRT
501: NWNKEVEEAQ KRLNKWDDGK APLLSAQE
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.