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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400072250 Potato plasma membrane 96.91 96.91
VIT_08s0056g01070.t01 Wine grape plasma membrane 64.54 64.54
VIT_08s0056g01120.t01 Wine grape plasma membrane 63.92 63.92
VIT_08s0056g01040.t01 Wine grape golgi, peroxisome, plasma membrane 49.48 62.18
VIT_08s0056g01000.t01 Wine grape plasma membrane, vacuole 50.31 58.65
VIT_08s0056g01080.t01 Wine grape plasma membrane 60.62 57.31
Solyc03g063730.2.1 Tomato plasma membrane 47.22 55.45
CDY38453 Canola plasma membrane 45.36 55.28
Bra023633.1-P Field mustard plasma membrane 52.78 53.44
AT3G03620.2 Thale cress plasma membrane 54.23 52.6
AT5G17700.2 Thale cress plasma membrane 53.81 52.52
Bra013957.1-P Field mustard plasma membrane 53.81 52.52
CDY51758 Canola plasma membrane 54.02 52.51
CDY50654 Canola plasma membrane 53.81 52.3
Bra031982.1-P Field mustard plasma membrane 53.81 52.3
Bra036449.1-P Field mustard plasma membrane 52.78 51.41
CDY29945 Canola plasma membrane 52.78 51.41
CDY21177 Canola plasma membrane 52.37 51.0
Solyc10g080340.1.1 Tomato plasma membrane 52.16 49.9
CDY16896 Canola plasma membrane 49.28 48.19
Solyc08g005880.2.1 Tomato plasma membrane 52.37 47.57
Solyc04g074850.2.1 Tomato cytosol, peroxisome, plasma membrane 46.39 46.68
Solyc04g074840.2.1 Tomato plasma membrane 44.74 43.14
Solyc11g010380.1.1 Tomato cytosol, plasma membrane, vacuole 42.68 41.99
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 41.65 40.16
Solyc10g051130.1.1 Tomato plasma membrane 39.18 39.75
Solyc03g025240.1.1 Tomato plasma membrane 32.37 39.35
Solyc01g109320.2.1 Tomato peroxisome 40.21 39.24
Solyc12g005850.1.1 Tomato plasma membrane 41.03 38.87
Solyc03g025200.2.1 Tomato plasma membrane 37.73 38.53
Solyc05g013470.2.1 Tomato plasma membrane 40.0 38.49
Solyc01g109310.2.1 Tomato plasma membrane 37.73 38.45
Solyc02g032660.2.1 Tomato cytosol, peroxisome, vacuole 39.79 38.29
Solyc07g008410.2.1 Tomato plasma membrane 37.32 37.71
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 38.76 37.68
Solyc02g080490.2.1 Tomato cytosol, peroxisome, plasma membrane 38.97 37.5
Solyc05g013450.2.1 Tomato cytosol, peroxisome, plasma membrane 39.38 37.09
Solyc12g019320.1.1 Tomato plasma membrane 37.73 36.45
Solyc05g013460.2.1 Tomato cytosol, peroxisome, plasma membrane 38.56 36.38
Solyc03g025190.2.1 Tomato plasma membrane 37.94 36.36
Solyc06g036130.2.1 Tomato plasma membrane 37.53 36.11
Solyc03g025220.2.1 Tomato plasma membrane 37.53 36.04
Solyc03g025230.2.1 Tomato plasma membrane 36.49 35.4
Solyc03g025250.2.1 Tomato plasma membrane 36.29 35.13
Solyc04g074860.2.1 Tomato plasma membrane 39.79 33.92
Solyc12g006360.1.1 Tomato plasma membrane 35.05 33.8
Protein Annotations
EnsemblPlants:Solyc10g081260.1.1EnsemblPlantsGene:Solyc10g081260.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF154PFAM:PF01554TIGRFAMs:TIGR00797
TMHMM:TMhelixUniParc:UPI00027698D0UniProt:K4D313MapMan:24.2.4.1.1::
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:K4D313]
Coordinates
chr10:+:62388427..62391216
Molecular Weight (calculated)
53254.7 Da
IEP (calculated)
6.345
GRAVY (calculated)
0.695
Length
485 amino acids
Sequence
(BLAST)
001: MDNSVQERLL DSQIEKVDDN LKERIYDESK KIWRVALPGV LSRVASFGSI VVTQSFIGHI SGLDLAAYAL VQTLTVRFVN GILIGMSSAT ETLCGQAYGA
101: GQYHMMGIYL QRSWIVGLIT LTALLPFFVL ATPIFHLLGE NGSIADAAGY VSYWFIPFIY NFVFSLTIQM YLQAQQKNII IAWLSIIQFV IHIPLSWLLV
201: IQLNYGVPGA MIALSISSWF VVVGEFVYIL GGWCPNTWNG FSLAALKDVL PVMKLSISSG VMVCLELWYN AVLVLLAGYM KNAEVAISAF SICLNINGWE
301: FMISLGFLGA ACVRIANELG KGDAKAAKFS IKVLVSTSLI IGLFFWVVCL IFGRNLGYLF SDEKAVADSV ADLSTLLAFS ILLNSIYPVL SGVAVGAGLQ
401: STVAIINLCC FYLIGVPIGA LLGYVAHLQV KGIWIGMICG VVTQSAALCY MTWKTDWDEE VSKAKQRLNR WYLKSSEECN QNDQA
Best Arabidopsis Sequence Match ( AT3G03620.2 )
(BLAST)
001: MSTQEEMEER LLREGSDAEG QSNNRESIYL RTKVWSEVNK MWRIALPSSL FRMTSFGSII VAQAFIGHSS ELGLAAYALL QSTFIRFLYG LMGGMSSATE
101: TLCGQAYGAE QYHTMGIYLQ RSWIVDMAVT TLFLPFIVLA GPILRLLGQN VEITKTVDEI YPWMIPYVYS LIFTMTIQMY LQAQMRNAIV GVLSTLSLAL
201: DLVVTWWCVS VMGMGIGGAL LGLNVGSWAM VLAEFVYIFG GWCPFTWTGF SIAAFVDLIP MLKLSISSGF MICLEYWYMS ILVLMAGYTK DAKIAISAFS
301: ICQYIYTWEL NICLGFLGAA CVRVANELGK GDAHAVRFSI KVILTISTLM GVIFSALCLA FCGRISYLFS NSDEVSDAVN DLSVILAVSI LLNSIQPILS
401: GVAVGAGMQS IVAVVNLASY YAIGIPLGLI LTYVFHLGVK GLWSGMLAGI AIQTIILCYI IYKTDWELEV KRTCERMKVW SLKPSNEESN PIIREESRSK
Arabidopsis Description
DTX24Protein DETOXIFICATION 24 [Source:UniProtKB/Swiss-Prot;Acc:F4J158]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.