Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21076 | Canola | cytosol, peroxisome, plasma membrane | 89.46 | 89.98 |
| CDY34598 | Canola | cytosol, peroxisome, vacuole | 89.27 | 89.79 |
| CDY26602 | Canola | cytosol, peroxisome, vacuole | 89.27 | 89.79 |
| CDY16041 | Canola | cytosol, peroxisome, vacuole | 89.27 | 89.79 |
| Bra026945.1-P | Field mustard | cytosol, peroxisome, vacuole | 80.65 | 89.38 |
| AT3G26590.1 | Thale cress | cytosol, peroxisome, plasma membrane | 73.75 | 77.0 |
| AT5G38030.1 | Thale cress | cytosol, peroxisome, plasma membrane | 72.22 | 75.7 |
| KRH45605 | Soybean | cytosol, peroxisome, plasma membrane | 47.13 | 70.09 |
| KRG99422 | Soybean | plasma membrane | 66.67 | 68.37 |
| Solyc05g013450.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 66.09 | 66.99 |
| PGSC0003DMT400047906 | Potato | cytosol, peroxisome, plasma membrane | 65.71 | 66.73 |
| VIT_00s0225g00050.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 64.75 | 66.4 |
| KRH74529 | Soybean | cytosol, peroxisome, plasma membrane | 62.26 | 62.74 |
| AT1G23300.1 | Thale cress | cytosol, plasma membrane, vacuole | 60.15 | 60.97 |
| AT1G47530.1 | Thale cress | cytosol, peroxisome, plasma membrane | 52.3 | 56.41 |
| KRH69631 | Soybean | mitochondrion | 53.45 | 55.03 |
| AT3G21690.1 | Thale cress | cytosol, peroxisome, plasma membrane | 44.64 | 46.05 |
| AT4G25640.2 | Thale cress | plasma membrane | 44.83 | 45.53 |
| AT1G61890.1 | Thale cress | plasma membrane | 43.68 | 45.51 |
| AT1G11670.1 | Thale cress | cytosol, peroxisome, plasma membrane | 43.49 | 45.13 |
| AT4G00350.1 | Thale cress | cytosol, peroxisome, plasma membrane | 45.98 | 44.28 |
| AT5G65380.1 | Thale cress | cytosol, peroxisome, plasma membrane | 40.42 | 43.42 |
| AT1G33090.1 | Thale cress | plasma membrane | 41.0 | 43.32 |
| AT1G33110.1 | Thale cress | plasma membrane | 40.42 | 42.71 |
| AT1G33100.1 | Thale cress | plasma membrane | 39.66 | 42.16 |
| AT5G10420.1 | Thale cress | plasma membrane | 39.46 | 42.13 |
| AT1G33080.1 | Thale cress | plasma membrane | 39.85 | 42.11 |
| AT5G44050.1 | Thale cress | plasma membrane | 39.46 | 41.96 |
| AT3G59030.1 | Thale cress | plasma membrane | 39.46 | 40.63 |
| AT4G21910.4 | Thale cress | plasma membrane | 39.46 | 40.47 |
| AT4G21903.2 | Thale cress | plasma membrane | 38.31 | 38.68 |
| AT3G03620.2 | Thale cress | plasma membrane | 33.72 | 35.2 |
| AT5G17700.2 | Thale cress | plasma membrane | 33.33 | 35.01 |
Protein Annotations
| MapMan:24.2.4.1.1 | EntrezGene:837853 | UniProt:A0A178WCP4 | ProteinID:AAF78500.1 | ProteinID:AEE28953.1 | EMBL:AK227815 |
| ArrayExpress:AT1G12950 | EnsemblPlantsGene:AT1G12950 | RefSeq:AT1G12950 | TAIR:AT1G12950 | RefSeq:AT1G12950-TAIR-G | EnsemblPlants:AT1G12950.1 |
| TAIR:AT1G12950.1 | Unigene:At.42053 | EMBL:BT023437 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0015238 |
| GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016049 | GO:GO:0030154 | GO:GO:0040007 |
| GO:GO:0048767 | GO:GO:0055085 | InterPro:MATE_fam | RefSeq:NP_172755.1 | ProteinID:OAP16197.1 | PFAM:PF01554 |
| PO:PO:0000084 | PO:PO:0000256 | PO:PO:0000262 | PO:PO:0009005 | PANTHER:PTHR11206 | PANTHER:PTHR11206:SF259 |
| UniProt:Q9LPV4 | Symbol:RSH2 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI000009E354 | SEG:seg |
Description
DTX31Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178WCP4]
Coordinates
chr1:+:4419714..4422684
Molecular Weight (calculated)
56909.1 Da
IEP (calculated)
5.232
GRAVY (calculated)
0.736
Length
522 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKDNDFKDP FLASTEEEEL DPATQKALME YLGVGSRASS LVSFSSTAVD IPPISGVGDF VREFRIESRK LWKLAGPAIF TTMSQYSLGA VTQVFAGHIS
101: TLALAAVSIE NSVIAGFSFG IMLGMGSALE TLCGQAFGAG KVSMLGVYLQ RSWVILSVTA LFLSLIYIFA APILTFIGQT AAISAMAGIF SIYMIPQIFA
201: YAINFPTAKF LQSQSKIMVM AGISGVVLVI HSFFTWLVMS RLHWGLPGLA LVLNTSWWVI VVAQLVYIFN CTCGEAWSGF TWEAFHNLWG FVKLSLASAA
301: MLCLEIWYFM ALVLFAGYLK NAEVSVAALS ICMNILGWAA MVAFGTNAAV SVRVSNELGA SHPRTAKFSL VVAVILSTAI GMFIAAGLLF FRNEYPVLFV
401: EDEEVRNVVR ELTPMLAFCI VINNVQPVLS GVAVGAGWQA VVAYVNIACY YLFGVPFGLL LGFKLEYGVM GIWWGMVTGT FVQSIVLTWM ICKTNWEKEA
501: SMAEERIKEW GGVPAEKETL LN
101: TLALAAVSIE NSVIAGFSFG IMLGMGSALE TLCGQAFGAG KVSMLGVYLQ RSWVILSVTA LFLSLIYIFA APILTFIGQT AAISAMAGIF SIYMIPQIFA
201: YAINFPTAKF LQSQSKIMVM AGISGVVLVI HSFFTWLVMS RLHWGLPGLA LVLNTSWWVI VVAQLVYIFN CTCGEAWSGF TWEAFHNLWG FVKLSLASAA
301: MLCLEIWYFM ALVLFAGYLK NAEVSVAALS ICMNILGWAA MVAFGTNAAV SVRVSNELGA SHPRTAKFSL VVAVILSTAI GMFIAAGLLF FRNEYPVLFV
401: EDEEVRNVVR ELTPMLAFCI VINNVQPVLS GVAVGAGWQA VVAYVNIACY YLFGVPFGLL LGFKLEYGVM GIWWGMVTGT FVQSIVLTWM ICKTNWEKEA
501: SMAEERIKEW GGVPAEKETL LN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.