Factsheet for GSMUA_Achr2P03560_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P05060_001	Banana	peroxisome	74.4	72.66
Zm00001d053234_P001	Maize	peroxisome	67.4	66.6
EES15223	Sorghum	plasma membrane	67.2	66.14
OQU80740	Sorghum	cytosol, peroxisome, plasma membrane	67.6	66.02
TraesCS7D01G272900.1	Wheat	plasma membrane	66.2	65.81
TraesCS7B01G170800.1	Wheat	cytosol, peroxisome, plasma membrane	66.2	65.81
TraesCS7A01G272800.1	Wheat	plasma membrane	65.8	65.41
Os08t0550200-01	Rice	cytosol, peroxisome, plasma membrane	67.8	64.94
GSMUA_Achr7P04510_001	Banana	plasma membrane	40.6	51.01
GSMUA_Achr6P00360_001	Banana	vacuole	40.6	49.88
GSMUA_Achr7P11770_001	Banana	plasma membrane	42.4	49.42
GSMUA_Achr9P26370_001	Banana	plasma membrane	44.6	47.85
GSMUA_Achr1P15340_001	Banana	plasma membrane	45.4	47.79
GSMUA_Achr5P01870_001	Banana	plasma membrane	45.0	47.67
GSMUA_Achr8P18130_001	Banana	mitochondrion, plasma membrane, vacuole	44.8	45.9
GSMUA_Achr7P12820_001	Banana	cytosol	39.4	45.5
GSMUA_Achr3P21260_001	Banana	plasma membrane	41.6	45.22
GSMUA_AchrUn_...	Banana	golgi, peroxisome, vacuole	45.4	44.86
GSMUA_Achr9P11610_001	Banana	plasma membrane	44.0	44.44
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	42.2	43.87
GSMUA_Achr2P14000_001	Banana	peroxisome, plasma membrane, vacuole	44.2	42.42
GSMUA_Achr7P21610_001	Banana	plasma membrane	40.8	42.06
GSMUA_Achr4P23760_001	Banana	plasma membrane	38.6	41.96
GSMUA_Achr6P04190_001	Banana	plasma membrane	35.2	40.74
GSMUA_Achr4P22990_001	Banana	plasma membrane	39.2	38.97
GSMUA_Achr8P03000_001	Banana	plasma membrane	38.0	38.15

Protein Annotations

MapMan:24.2.4.1.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EnsemblPlantsGene:GSMUA_Achr2G03560_001	EnsemblPlants:GSMUA_Achr2P03560_001	EnsemblPlants:GSMUA_Achr2T03560_001	UniProt:M0S4U7	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR11206	PANTHER:PTHR11206:SF259	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0002962450	SEG:seg

Description

Putative Protein TRANSPARENT TESTA 12 [Source:GMGC_GENE;Acc:GSMUA_Achr2G03560_001]

Coordinates

chr2:-:9228836..9234025

Molecular Weight (calculated)

54901.0 Da

IEP (calculated)

7.830

GRAVY (calculated)

0.692

Length

500 amino acids

Sequence
(BLAST)

001: MASEQMAEPL LGSGKERGDL EEIRSLKQFL KQWVEENKRL WYLAGPSIFT SICRYSLGAT TQVFAGHLTT LELDAVSTEN MVIAGLAFGI MMGMGSALET
101: LCGQAYGAKQ LHMLGVYMQR SWVILLTTCT CLLPVYLFAA PILRLFKQDA DIAELAGRFS LYMIPQLFAY GLNFPISKFL QAQSKVMVMA VVAAIALVFH
201: VCLSWLLIVQ FKLGLVGAAT SLNIAWWIVV LAQFGYIAMG YCPGAWNGFS WGAFRGLGSF AWLSIGSAIM LCLEFWYYMI IIVLVGRLEN AQIAVAAVSI
301: CTNINGWEFM VFFGFNVAIS VRISNELGAR RPRAAKFAIV CVIMSSLTLG LIFFTLVLAL KDVYGIPFTN SPDVIRAVSS LAVIFSFTLL FNSVQPVLTG
401: VAVGAGWQWL VAYVNIGCYY AFGIPVGCLL AFHFGFGVQG MWSGMLSGVV LQTMIIVAMT VTTNWNKEAM EADSRIKKWS GSIEETSMNY RTSEGPDNLA

Best Arabidopsis Sequence Match ( AT1G47530.1 )
(BLAST)

001: MGKDKTLPLL DPREPPELTG TKSASKVWAK EFGEESKRLW ELAGPAIFTA ISQYSLGALT QTFSGRLGEL ELAAVSVENS VISGLAFGVM LGMGSALETL
101: CGQAYGAGQI RMMGIYMQRS WVILFTTALF LLPVYIWAPP ILSFFGEAPH ISKAAGKFAL WMIPQLFAYA ANFPIQKFLQ SQRKVLVMAW ISGVVLVIHA
201: VFSWLFILYF KWGLVGAAIT LNTSWWLIVI GQLLYILITK SDGAWTGFSM LAFRDLYGFV KLSLASALML CLEFWYLMVL VVVTGLLPNP LIPVDAISIC
301: MNIEGWTAMI SIGFNAAISV RVSNELGAGN AALAKFSVIV VSITSTLIGI VCMIVVLATK DSFPYLFTSS EAVAAETTRI AVLLGFTVLL NSLQPVLSGV
401: AVGAGWQALV AYVNIACYYI IGLPAGLVLG FTLDLGVQGI WGGMVAGICL QTLILIGIIY FTNWNKEAEQ AESRVQRWGG TAQE

Arabidopsis Description

DTX33Protein DETOXIFICATION 33 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX83]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.