Factsheet for VIT_00s0225g00080.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
vacuole 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0225g00050.t01	Wine grape	cytosol, peroxisome, plasma membrane	72.67	73.67
VIT_00s0225g00060.t01	Wine grape	plasma membrane	72.87	73.44
VIT_00s0225g00070.t01	Wine grape	plasma membrane	66.47	68.46
VIT_18s0001g11760.t01	Wine grape	plasma membrane	51.74	55.74
VIT_16s0050g00930.t01	Wine grape	plasma membrane	45.74	47.87
VIT_10s0116g01860.t01	Wine grape	plasma membrane	46.71	47.82
VIT_18s0001g06790.t01	Wine grape	plasma membrane	44.96	47.35
VIT_12s0059g02180.t01	Wine grape	cytosol, peroxisome, plasma membrane	46.32	47.14
VIT_12s0059g02220.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	46.32	47.14
VIT_16s0050g00910.t01	Wine grape	plasma membrane	44.57	47.03
VIT_16s0050g00900.t01	Wine grape	plasma membrane	44.38	46.83
VIT_10s0116g01880.t01	Wine grape	plasma membrane	45.74	46.37
VIT_15s0046g01800.t01	Wine grape	plasma membrane	43.02	45.96
VIT_18s0001g06820.t01	Wine grape	plasma membrane	42.83	45.66
VIT_12s0059g02160.t01	Wine grape	plasma membrane	45.35	45.44
VIT_08s0056g00890.t01	Wine grape	plasma membrane	37.98	45.37
VIT_08s0056g01120.t01	Wine grape	plasma membrane	42.44	45.15
VIT_10s0116g01870.t01	Wine grape	plastid	44.19	44.71
VIT_08s0056g00780.t01	Wine grape	golgi, peroxisome, plasma membrane	42.25	44.04
VIT_08s0056g01070.t01	Wine grape	plasma membrane	40.7	43.3
VIT_08s0056g01000.t01	Wine grape	plasma membrane, vacuole	34.11	42.31
VIT_12s0028g01160.t01	Wine grape	peroxisome, plasma membrane, vacuole	41.47	42.29
VIT_12s0028g01150.t01	Wine grape	plasma membrane	40.7	41.67
VIT_08s0056g01040.t01	Wine grape	golgi, peroxisome, plasma membrane	31.01	41.45
VIT_08s0056g01080.t01	Wine grape	plasma membrane	38.95	39.18
VIT_08s0056g00870.t01	Wine grape	cytosol, peroxisome, plasma membrane	35.47	37.58
VIT_12s0059g02230.t01	Wine grape	cytosol, nucleus, plasma membrane	44.77	33.58

Protein Annotations

EntrezGene:100254629	wikigene:100254629	MapMan:24.2.4.1.1	EMBL:AM423437	ProteinID:CAN62306	ProteinID:CAN62306.1
ProteinID:CBI23364	ProteinID:CBI23364.3	UniProt:D7SYR3	EMBL:FN595256	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	EntrezGene:LOC100254629	wikigene:LOC100254629	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR11206	PANTHER:PTHR11206:SF259	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI00015CD75D	ArrayExpress:VIT_00s0225g00080
EnsemblPlantsGene:VIT_00s0225g00080	EnsemblPlants:VIT_00s0225g00080.t01	RefSeq:XP_002273431	RefSeq:XP_002273431.2	SEG:seg	:

Description

Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:D7SYR3]

Coordinates

chrUn:-:14613294..14616942

Molecular Weight (calculated)

56524.7 Da

IEP (calculated)

8.652

GRAVY (calculated)

0.658

Length

516 amino acids

Sequence
(BLAST)

001: MENSEQPLLS TRDEDQTPGQ PHNPILANTS LFSSHNANYG NDIDPINGVG DFFREFFVES KKLWRLAGPA IFSSLCRYSL GAVTQVFAGH LSALDLAAFA
101: IENSVIGGFS SGILFGMGSA LETLCGQAFG ARRPDMLGIY LQRSWVILIT TSLLLLSFLY IFAGQILKLI GQTEAISKAA GIFARWMIPQ LFAYATYFPI
201: IKFLQSQRKI MMMAWISFVA LILHTLFSWL LMLKLGWGLV GAAVVLNASW WFIVVALLLY VLSGSCGHAW SGFSWKAFQN LWAFVRLSLA SGVMLCLEVW
301: YFMALTLFAG YLKNAEVSVD ALSICLSVLS WTTMVSLGCN AAISVRVSNE LGAGHPRTAK FAILVVVISS FFISLVLSLI LVLGRRQYPA LFSSNPEVKQ
401: QVYALTPLLA VCIVINNVQP VLSGVAIGAG WQAFVAYVNI GCYYVFGVPL GLILGYVLHF GVKGIWCGML SGTVVQTCIL FGMIYRTNWN REVSMAGDRI
501: RKWGGGAAST ENDVEK

Best Arabidopsis Sequence Match ( AT3G26590.1 )
(BLAST)

001: MAKDKDITET LLTAAEERSD LPFLSVDDIP PITTVGGFVR EFNVETKKLW YLAGPAIFTS VNQYSLGAIT QVFAGHISTI ALAAVSVENS VVAGFSFGIM
101: LGMGSALETL CGQAFGAGKL SMLGVYLQRS WVILNVTALI LSLLYIFAAP ILASIGQTAA ISSAAGIFSI YMIPQIFAYA INFPTAKFLQ SQSKIMVMAV
201: ISAVALVIHV PLTWFVIVKL QWGMPGLAVV LNASWCFIDM AQLVYIFSGT CGEAWSGFSW EAFHNLWSFV RLSLASAVML CLEVWYFMAI ILFAGYLKNA
301: EISVAALSIC MNILGWTAMI AIGMNTAVSV RVSNELGANH PRTAKFSLLV AVITSTLIGF IVSMILLIFR DQYPSLFVKD EKVIILVKEL TPILALSIVI
401: NNVQPVLSGV AVGAGWQAVV AYVNIACYYV FGIPFGLLLG YKLNYGVMGI WCGMLTGTVV QTIVLTWMIC KTNWDTEASM AEDRIREWGG EVSEIKQLIN

Arabidopsis Description

DTX29Protein DETOXIFICATION 29 [Source:UniProtKB/Swiss-Prot;Acc:Q38956]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.