CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 4
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012431.1-P	Field mustard	plasma membrane	100.0	100.0
CDY40278	Canola	plasma membrane	99.61	43.49
CDY28437	Canola	plasma membrane	99.61	43.49
AT1G27040.1	Thale cress	plasma membrane	83.53	37.57
CDY11649	Canola	cytosol, peroxisome, plasma membrane	77.65	33.28
CDY70795	Canola	plasma membrane	41.18	33.23
Zm00001d036942_P001	Maize	plasma membrane	69.02	32.59
Os06t0581000-01	Rice	plasma membrane	72.16	31.19
TraesCS7A01G365100.1	Wheat	plasma membrane	70.59	30.66
CDY38765	Canola	plasma membrane	78.04	30.62
Zm00001d046383_P001	Maize	plasma membrane	70.2	30.24
EER89980	Sorghum	plasma membrane	71.37	30.23
CDY69100	Canola	plasma membrane	39.22	30.12
GSMUA_Achr7P08880_001	Banana	plasma membrane	63.92	29.48
TraesCS7D01G357300.2	Wheat	plasma membrane	70.59	29.13
CDY30051	Canola	cytosol, peroxisome, plasma membrane	39.61	28.94
Zm00001d036941_P001	Maize	plasma membrane	69.02	28.9
CDY67653	Canola	peroxisome	40.39	28.37
HORVU7Hr1G086170.5	Barley	cytosol, peroxisome, plastid	69.8	28.21
CDY00323	Canola	plasma membrane	62.35	28.19
CDX84348	Canola	plasma membrane	62.35	28.19
GSMUA_Achr2P16840_001	Banana	plasma membrane, plastid	65.49	27.69
GSMUA_Achr6P00820_001	Banana	plasma membrane	65.49	26.42
TraesCS7B01G262200.1	Wheat	plasma membrane, plastid	70.98	26.23
CDY44319	Canola	plasma membrane	39.61	21.44
CDY04575	Canola	plasma membrane	43.14	21.24
CDY38629	Canola	plasma membrane	39.61	21.09
CDY52286	Canola	plasma membrane	40.78	20.16
CDY15763	Canola	plasma membrane	38.43	20.04
CDY52284	Canola	plasma membrane	40.39	20.0
CDY15100	Canola	plasma membrane	40.39	17.64
CDY15967	Canola	plasma membrane	39.61	17.6
CDY31242	Canola	plasma membrane	39.61	17.57
CDY21035	Canola	plasma membrane	39.61	17.57
CDX93764	Canola	plasma membrane	41.18	17.5
CDY26539	Canola	plasma membrane	39.22	17.42
CDY50182	Canola	plasma membrane	39.61	17.18
CDY45207	Canola	golgi, plasma membrane	39.22	17.04
CDX71495	Canola	plasma membrane	39.22	16.67
CDY30787	Canola	mitochondrion	39.22	16.64
CDY45893	Canola	golgi, peroxisome, plasma membrane	23.14	12.37
CDX91126	Canola	plastid	29.41	12.06
CDX85654	Canola	cytosol, plasma membrane, plastid	29.02	11.9
CDY45147	Canola	mitochondrion	1.18	0.9
CDY65523	Canola	plastid	0.78	0.62

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:A0A078HR07	UniProt:A0A078HR07	EnsemblPlants:CDY40277	ProteinID:CDY40277
ProteinID:CDY40277.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00069446001	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PFscan:PS50850	PANTHER:PTHR11654
PANTHER:PTHR11654:SF98	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0002540B8A	SEG:seg	:

Description

BnaA07g09230DBnaA07g09230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HR07]

Coordinates

chrLK032467:-:210161..212071

Molecular Weight (calculated)

27766.8 Da

IEP (calculated)

8.324

GRAVY (calculated)

0.472

Length

255 amino acids

Sequence
(BLAST)

001: MQGEDSKWEG YADWRNRAAV KGRHGGMLAA SFVLAVEVLE NLAFLANASN LVTYLTEFMH FSLSRAASEV SAFMGTAFLL ALLGGFFSDA FLSTFIVFII
101: SAFIEFMGLI LLTIQARRPS LMPPPCKSSP ASPCEPVHGS KAALLFVGLY LAALGIGGIK GSLPSHGAEQ FDESDPKGRK QRSTFFNYFV FCLSCGALVA
201: VTFVVWLEDN VGWEWGFGVS TISIFLSILV FLSGSRFYKN RIPRGSPLTT ILKVT

Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)

001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS

Arabidopsis Description

NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.