CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
BaCelLo:	cytosol
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67653	Canola	peroxisome	80.38	69.97
Bra027836.1-P	Field mustard	plasma membrane	88.92	46.6
AT1G59740.1	Thale cress	plasma membrane	82.91	44.33
CDY40277	Canola	plasma membrane	33.23	41.18
KRH01875	Soybean	plasma membrane	61.71	36.18
PGSC0003DMT400053373	Potato	cytosol, peroxisome, plasma membrane	68.04	35.54
KRH51284	Soybean	plasma membrane	63.61	35.45
Solyc01g103030.2.1	Tomato	cytosol, peroxisome, plasma membrane	67.41	35.15
VIT_12s0035g01820.t01	Wine grape	golgi, peroxisome, plasma membrane	67.41	34.92
KRH26263	Soybean	cytosol, peroxisome, plasma membrane	66.14	34.15
TraesCS2B01G326200.1	Wheat	plasma membrane	62.66	34.14
TraesCS2A01G309100.1	Wheat	plasma membrane	62.34	33.97
TraesCS2D01G307400.1	Wheat	plasma membrane	62.34	33.85
CDY45893	Canola	golgi, peroxisome, plasma membrane	48.73	32.29
EES12219	Sorghum	plasma membrane	60.13	32.26
CDX93764	Canola	plasma membrane	61.08	32.17
Os04t0441800-01	Rice	plasma membrane	62.03	32.08
HORVU2Hr1G076880.23	Barley	golgi, peroxisome	59.49	32.03
Zm00001d003603_P001	Maize	plasma membrane	59.49	31.86
CDY50182	Canola	plasma membrane	58.86	31.63
CDY69100	Canola	plasma membrane	29.75	28.31
CDY30051	Canola	cytosol, peroxisome, plasma membrane	30.06	27.22
KXG24751	Sorghum	peroxisome, plasma membrane, vacuole	50.0	26.25
Zm00001d049349_P001	Maize	mitochondrion	48.42	21.34
CDY44319	Canola	plasma membrane	31.65	21.23
CDY38629	Canola	plasma membrane	31.65	20.88
CDY40278	Canola	plasma membrane	35.44	19.18
CDY28437	Canola	plasma membrane	35.44	19.18
CDY11649	Canola	cytosol, peroxisome, plasma membrane	34.81	18.49
CDY52284	Canola	plasma membrane	30.06	18.45
CDY52286	Canola	plasma membrane	30.06	18.41
CDX84348	Canola	plasma membrane	31.96	17.91
CDY04575	Canola	plasma membrane	29.11	17.76
CDY00323	Canola	plasma membrane	31.65	17.73
CDY45207	Canola	golgi, plasma membrane	32.91	17.72
CDX71495	Canola	plasma membrane	33.23	17.5
CDY30787	Canola	mitochondrion	33.23	17.47
CDY15763	Canola	plasma membrane	26.9	17.38
CDY26539	Canola	plasma membrane	31.33	17.25
CDY15967	Canola	plasma membrane	31.33	17.25
CDY21035	Canola	plasma membrane	31.33	17.22
CDY31242	Canola	plasma membrane	31.33	17.22
CDY38765	Canola	plasma membrane	34.81	16.92
CDY15100	Canola	plasma membrane	30.38	16.44
CDX91126	Canola	plastid	28.16	14.31
CDX85654	Canola	cytosol, plasma membrane, plastid	27.85	14.15
CDY45147	Canola	mitochondrion	5.06	4.82
CDY65523	Canola	plastid	4.43	4.32

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:A0A078JWM0	UniProt:A0A078JWM0	EnsemblPlants:CDY70795	ProteinID:CDY70795
ProteinID:CDY70795.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00007543001	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF187
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0004EEE324	:	:	:

Description

BnaCnng69820DBnaCnng69820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWM0]

Coordinates

chrLK043365:-:247..2923

Molecular Weight (calculated)

35326.7 Da

IEP (calculated)

6.242

GRAVY (calculated)

0.220

Length

316 amino acids

Sequence
(BLAST)

001: MEEANNQSKK WEQEEISNEM NNWELTEEES VDWRGRPSNP KHGGTRAALF VLGLQAFEIM GIAAVGNNLI TYVINEMHFP LSKAANIVTN FVGTIFIFGL
101: LGGYLSDAFL GSFWTMLIFG FVELSGFILL SVQAHLPQLK PPECNPLIDQ SSCEEAKGFK ATFFFMALYL VALGSGCVKP NMIAHGADQF SQSHPKQSKR
201: LSSYFNAAYF AFSMGELIAL TLLVWVQTHS GMDVGFGVSA AAMTIGLISL VSGTMFFRNK RPRRSLFTPI AQFTCSSWNL RDECSWNFLV EPSTIRTIRE
301: FSFYCLFTLV IQAFII

Best Arabidopsis Sequence Match ( AT1G12110.1 )
(BLAST)

001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH

Arabidopsis Description

NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.