Factsheet for Solyc01g103030.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053373	Potato	cytosol, peroxisome, plasma membrane	97.36	97.52
KRH51284	Soybean	plasma membrane	69.47	74.25
KRH01875	Soybean	plasma membrane	65.35	73.47
VIT_12s0035g01820.t01	Wine grape	golgi, peroxisome, plasma membrane	73.27	72.79
AT1G59740.1	Thale cress	plasma membrane	70.96	72.76
Bra035429.1-P	Field mustard	plasma membrane	70.3	71.72
KRH26263	Soybean	cytosol, peroxisome, plasma membrane	72.11	71.41
Bra027836.1-P	Field mustard	plasma membrane	70.96	71.31
CDY65523	Canola	plastid	37.62	70.37
CDY45893	Canola	golgi, peroxisome, plasma membrane	55.28	70.23
CDY45147	Canola	mitochondrion	37.95	69.28
Solyc11g042820.1.1	Tomato	peroxisome, plasma membrane, vacuole	66.34	67.79
CDY70795	Canola	plasma membrane	35.15	67.41
CDY67653	Canola	peroxisome	39.11	65.29
TraesCS2A01G309100.1	Wheat	plasma membrane	61.72	64.48
TraesCS2B01G326200.1	Wheat	plasma membrane	61.39	64.14
TraesCS2D01G307400.1	Wheat	plasma membrane	61.55	64.09
EES12219	Sorghum	plasma membrane	61.06	62.82
Zm00001d003603_P001	Maize	plasma membrane	60.23	61.86
Os04t0441800-01	Rice	plasma membrane	60.73	60.23
KXG24751	Sorghum	peroxisome, plasma membrane, vacuole	53.3	53.65
Zm00001d049349_P001	Maize	mitochondrion	52.31	44.21
HORVU2Hr1G076880.23	Barley	golgi, peroxisome	39.77	41.06
Solyc04g079510.1.1	Tomato	plasma membrane	38.45	40.81
Solyc04g079520.2.1	Tomato	plasma membrane	38.78	40.38
Solyc05g007000.2.1	Tomato	plasma membrane	37.79	40.32
Solyc03g005950.1.1	Tomato	plasma membrane	41.58	40.19
Solyc05g006990.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	38.61	39.93
Solyc04g005790.2.1	Tomato	plasma membrane	38.28	39.93
Solyc04g079530.2.1	Tomato	plasma membrane	37.62	39.38
Solyc10g039290.1.1	Tomato	plasma membrane	37.13	39.34
Solyc07g032490.2.1	Tomato	plasma membrane	36.8	39.19
Solyc01g102360.1.1	Tomato	plasma membrane	39.27	39.08
Solyc01g096880.2.1	Tomato	plasma membrane	36.14	38.15
Solyc08g061010.2.1	Tomato	plasma membrane	16.34	37.22
Solyc12g006050.1.1	Tomato	cytosol, peroxisome, plasma membrane	36.3	37.16
Solyc07g049290.2.1	Tomato	nucleus	35.97	36.89
Solyc08g078950.2.1	Tomato	cytosol, peroxisome, plasma membrane	35.64	36.61
Solyc08g007430.1.1	Tomato	cytosol, peroxisome, plasma membrane	35.31	36.27
Solyc06g060620.2.1	Tomato	plasma membrane	34.98	35.81
Solyc03g113250.2.1	Tomato	plasma membrane	33.17	32.95
Solyc08g061020.1.1	Tomato	plasma membrane	15.68	31.67

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
UniProt:K4B1M9	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654
PANTHER:PTHR11654:SF187	SUPFAM:SSF103473	EnsemblPlantsGene:Solyc01g103030.2	EnsemblPlants:Solyc01g103030.2.1	TMHMM:TMhelix	UniParc:UPI000276803D
SEG:seg	:	:	:	:	:

Description

Protein NRT1/ PTR FAMILY 4.3 [Source:Projected from Arabidopsis thaliana (AT1G59740) UniProtKB/Swiss-Prot;Acc:Q93VV5]

Coordinates

chr1:-:91697125..91701757

Molecular Weight (calculated)

67189.9 Da

IEP (calculated)

8.640

GRAVY (calculated)

0.268

Length

606 amino acids

Sequence
(BLAST)

001: MEMIEARGDN NNNNNSCEEV IITTTTSVDW RGRPSNPIKH GGMKAAAFVL GLQGFEIMGI AAVGNNLITY VINEMHFSLS ESANIVTNFI GTIFILSLLG
101: GYLSDSYLAS FWTILIFGFI ELSGFILLSV QAHLPQLKPP KCNMLTDGEK CVEAKGFKAL IFFVALYLVA LGSGCVKPNM IAHGGDQFDQ ENPKQSKQLS
201: RYFNAAYFAF SMGELIALTI LVYVQTHSGM DVGFGVSAAA MALGLICLVC GTLFYRNKPP QGSIFTPIAQ VMVAAFLNRK LVSPSDAHML HKAHPTKAPP
301: NANPTINLLH TNRFRFLDKA CTKMQDGNTT KEISRWRLCT VTQVEQVKIL ISVLPIFACT IIFNTILAQL QTFSVQQGST MNTKLTKNFH IPPASLQSIP
401: YIMLIFIVPL YDTFFVPFAR KFTGHESGIT PLQRIGFGLF FATFSMVSAA LMENKRRISA MESNEILSIF WITPQFLIFG ISEMFTAVGL IEFFYKQSLK
501: GSMQSFLTAI TYCSYSFGFY LSSLLVSLVN KITSSHHGGG WLSDNNLNKD RLDLFYWLLA ILSLLNFFNY LFWAKWYSKN GSSSSSSSTT TNQESNSKVV
601: GEDGIV

Best Arabidopsis Sequence Match ( AT1G59740.1 )
(BLAST)

001: MAEINKQSNK WEQEEVSNEN NWELAEEESV DWRGRPSNPN KHGGMRAALF VLGLQAFEIM GIAAVGNNLI TYVINEMHFP LSKAANIVTN FVGTIFIFAL
101: LGGYLSDAFL GSFWTIIIFG FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN MIAHGADQFS QSHPKQSKRL
201: SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND
301: VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM
401: LIFLVPLYDS FLVPFARKLT GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE MFTAVGLIEF FYKQSAKGME
501: SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I

Arabidopsis Description

NPF4.3Protein NRT1/ PTR FAMILY 4.3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VV5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.