Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 2
  • vacuole 2
  • extracellular 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g007000.2.1 Tomato plasma membrane 85.67 88.38
PGSC0003DMT400045412 Potato mitochondrion 93.52 87.4
Solyc04g005790.2.1 Tomato plasma membrane 78.84 79.52
KRH69373 Soybean plasma membrane 73.38 74.14
KRH74766 Soybean plasma membrane 72.18 73.06
KRG99175 Soybean plasma membrane 72.7 72.82
VIT_01s0026g01570.t01 Wine grape plasma membrane 72.53 72.65
KRH45840 Soybean plasma membrane 72.87 71.89
GSMUA_Achr7P08880_001 Banana plasma membrane 66.55 70.52
KRH45842 Soybean plasma membrane 71.16 70.2
Zm00001d046383_P001 Maize plasma membrane 67.06 66.39
Os06t0581000-01 Rice plasma membrane 66.72 66.27
TraesCS7A01G365100.1 Wheat plasma membrane 66.04 65.93
EER89980 Sorghum plasma membrane 66.72 64.95
GSMUA_Achr2P16840_001 Banana plasma membrane, plastid 65.19 63.35
TraesCS7D01G357300.2 Wheat plasma membrane 66.21 62.78
Zm00001d036942_P001 Maize plasma membrane 57.51 62.41
HORVU7Hr1G086170.5 Barley cytosol, peroxisome, plastid 66.04 61.33
Zm00001d036941_P001 Maize plasma membrane 63.65 61.25
GSMUA_Achr6P00820_001 Banana plasma membrane 65.7 60.92
Solyc03g113250.2.1 Tomato plasma membrane 59.04 56.72
TraesCS7B01G262200.1 Wheat plasma membrane, plastid 66.38 56.38
Solyc04g079510.1.1 Tomato plasma membrane 40.27 41.33
Solyc04g079520.2.1 Tomato plasma membrane 39.76 40.03
Solyc10g039290.1.1 Tomato plasma membrane 38.74 39.69
Solyc01g103030.2.1 Tomato cytosol, peroxisome, plasma membrane 39.93 38.61
Solyc04g079530.2.1 Tomato plasma membrane 38.05 38.51
Solyc01g096880.2.1 Tomato plasma membrane 37.2 37.98
Solyc08g078950.2.1 Tomato cytosol, peroxisome, plasma membrane 38.05 37.8
Solyc11g042820.1.1 Tomato peroxisome, plasma membrane, vacuole 38.23 37.77
Solyc07g032490.2.1 Tomato plasma membrane 36.18 37.26
Solyc01g102360.1.1 Tomato plasma membrane 38.57 37.11
Solyc03g005950.1.1 Tomato plasma membrane 39.25 36.68
Solyc08g007430.1.1 Tomato cytosol, peroxisome, plasma membrane 36.86 36.61
Solyc06g060620.2.1 Tomato plasma membrane 36.52 36.15
Solyc12g006050.1.1 Tomato cytosol, peroxisome, plasma membrane 36.35 35.98
Solyc08g061020.1.1 Tomato plasma membrane 17.92 35.0
Solyc07g049290.2.1 Tomato nucleus 34.81 34.52
Solyc08g061010.2.1 Tomato plasma membrane 15.36 33.83
Protein Annotations
EnsemblPlants:Solyc05g006990.2.1EnsemblPlantsGene:Solyc05g006990.2GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:MFS_trans_sf
InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF98PFAM:PF00854SEG:segSUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI00027658A3UniProt:K4BWM5MapMan:11.1.4.1MapMan:24.2.2.9:
Description
No Description!
Coordinates
chr5:+:1582054..1588984
Molecular Weight (calculated)
63839.8 Da
IEP (calculated)
8.633
GRAVY (calculated)
0.419
Length
586 amino acids
Sequence
(BLAST)
001: MDTENQSQLS TWPGYVDWKN KPALTNKHGG LIPASFVLVV EVLENLAYLA NASNLVLYMS EYMHFSPSKS ANSVTNFMGT AFLLALLGGF LSDAFVTTYY
101: IYLISALIEF LGLVVLTIQA RSGSLKPPTC DLQATPNVPC EQVHGAQAAM LFIGLYLVAL GVGGIKGSLP PHGAEQFDES TPQGRKQRSS FFNYFVFCLS
201: FGALIAVTFV VWVEDNKGWQ WGFGISTLAI FLSIPIFLAG SSFYRNKIPS GSPLTTISKV LIAALVNSGA SRNSTSAIVS MTSSPSPPIP TGKENGEDSN
301: RKDVGSMHTP STSLSFLNRA VSDTPACSSS AFECTVQQVE EVKIVMKILP IFACTIMLNC CLAQLSTFSV QQAASMNTKV GSLKVPPASL PVFPVVFIMI
401: LAPVYDHFII PFARRVTKTE MGISHLQRIG IGLFLSIVAM AIAALVEIKR KRVATDSGLI DSAQPLPITF FWIAFQYLFL GSADLFVLAG LLEFCFSEAP
501: VSMRSLATSL SWASLAIGYY LSSAIVSIVN RVTGISTNKP WLAGSSLNHY HLDRFYWLMC ILSALNFMHY LFWATKYKYT SLKSSK
Best Arabidopsis Sequence Match ( AT1G69850.1 )
(BLAST)
001: MEVEEEVSRW EGYADWRNRA AVKGRHGGML AASFVLVVEI LENLAYLANA SNLVLYLREY MHMSPSKSAN DVTNFMGTAF LLALLGGFLS DAFFSTFQIF
101: LISASIEFLG LIILTIQART PSLMPPSCDS PTCEEVSGSK AAMLFVGLYL VALGVGGIKG SLASHGAEQF DESTPKGRKQ RSTFFNYFVF CLACGALVAV
201: TFVVWLEDNK GWEWGFGVST IAIFVSILIF LSGSRFYRNK IPCGSPLTTI LKVLLAASVK CCSSGSSSNA VASMSVSPSN HCVSKGKKEV ESQGELEKPR
301: QEEALPPRAQ LTNSLKVLNG AADEKPVHRL LECTVQQVED VKIVLKMLPI FACTIMLNCC LAQLSTFSVQ QAASMNTKIG SLKIPPASLP IFPVVFIMIL
401: APIYDHLIIP FARKATKTET GVTHLQRIGV GLVLSILAMA VAALVEIKRK GVAKDSGLLD SKETLPVTFL WIALQYLFLG SADLFTLAGL LEYFFTEAPS
501: SMRSLATSLS WASLAMGYYL SSVIVSIVNS ITGSSGNTPW LRGKSINRYK LDYFYWLMCV LSAANFLHYL FWAMRYKYRS TGSRS
Arabidopsis Description
NPF4.6Protein NRT1/ PTR FAMILY 4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H157]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.