Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plastid 1
  • plasma membrane 4
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
ChloroP:plastid
MultiLoc:plasma membrane
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400046950 Potato plasma membrane 96.55 96.24
Solyc10g039290.1.1 Tomato plasma membrane 65.85 70.1
KRG96656 Soybean plasma membrane 56.16 59.38
KRG90426 Soybean plasma membrane 57.96 58.74
KRH68384 Soybean plasma membrane 55.99 58.59
VIT_14s0060g00220.t01 Wine grape plasma membrane 58.78 57.93
KRH33721 Soybean plasma membrane 57.31 57.78
Solyc04g079510.1.1 Tomato plasma membrane 43.35 46.23
Solyc04g079530.2.1 Tomato plasma membrane 42.04 44.21
Solyc04g079520.2.1 Tomato plasma membrane 42.04 43.99
Solyc05g007000.2.1 Tomato plasma membrane 37.44 40.14
Solyc04g005790.2.1 Tomato plasma membrane 37.6 39.41
Solyc01g103030.2.1 Tomato cytosol, peroxisome, plasma membrane 39.08 39.27
Zm00001d003208_P001 Maize plasma membrane 29.56 39.22
Solyc03g005950.1.1 Tomato plasma membrane 40.07 38.92
Solyc05g006990.2.1 Tomato endoplasmic reticulum, peroxisome, plasma membrane 37.11 38.57
Solyc11g042820.1.1 Tomato peroxisome, plasma membrane, vacuole 37.44 38.45
OQU81850 Sorghum plasma membrane 33.83 37.45
OQU81851 Sorghum plasma membrane 34.32 37.12
TraesCS5A01G056100.1 Wheat plasma membrane 28.74 36.84
HORVU2Hr1G007730.1 Barley mitochondrion 21.18 36.65
TraesCS5B01G060800.1 Wheat plasma membrane 33.66 36.54
Os04t0491500-02 Rice plasma membrane 33.33 36.45
TraesCS5B01G060500.1 Wheat plasma membrane 33.33 36.25
TraesCS5D01G067100.1 Wheat plasma membrane 33.33 36.19
TraesCS2B01G368700.1 Wheat plasma membrane 33.17 36.14
TraesCS5A01G056200.2 Wheat plasma membrane 33.33 36.12
TraesCS5D01G067400.1 Wheat plasma membrane 33.17 36.01
TraesCS2D01G348500.1 Wheat plasma membrane 33.0 35.96
HORVU2Hr1G085210.21 Barley plasma membrane 33.0 35.83
TraesCS2A01G350100.1 Wheat plasma membrane 32.84 35.78
TraesCS2D01G348600.1 Wheat plasma membrane 32.51 35.42
TraesCS2A01G350300.1 Wheat plasma membrane 30.87 35.4
Solyc08g061010.2.1 Tomato plasma membrane 15.44 35.34
EES15876 Sorghum plasma membrane 32.51 35.23
EES15875 Sorghum plasma membrane 32.84 35.15
KXG26617 Sorghum plasma membrane 33.83 34.97
EES11151 Sorghum plasma membrane 32.84 34.36
Zm00001d004621_P001 Maize plasma membrane 27.42 34.36
OQU83318 Sorghum mitochondrion, plasma membrane 28.9 34.31
TraesCS2B01G368600.2 Wheat plasma membrane 32.68 34.25
Solyc07g032490.2.1 Tomato plasma membrane 31.86 34.09
EES14657 Sorghum plasma membrane 31.86 34.04
Zm00001d041163_P001 Maize plasma membrane 32.18 34.03
Solyc08g007430.1.1 Tomato cytosol, peroxisome, plasma membrane 32.84 33.9
Solyc07g049290.2.1 Tomato nucleus 32.84 33.84
EES15877 Sorghum plasma membrane 31.53 33.57
TraesCS5A01G388000.1 Wheat plasma membrane 32.02 33.51
KXG28299 Sorghum plasma membrane 31.69 33.45
Solyc08g078950.2.1 Tomato cytosol, peroxisome, plasma membrane 32.35 33.39
HORVU5Hr1G095020.1 Barley plasma membrane 31.86 33.22
TraesCS2D01G259400.2 Wheat plasma membrane 31.53 33.16
Solyc12g006050.1.1 Tomato cytosol, peroxisome, plasma membrane 32.18 33.11
Os12t0231000-01 Rice plasma membrane 31.69 33.1
HORVU2Hr1G062730.7 Barley plasma membrane 31.36 33.05
TraesCS2A01G264500.1 Wheat plasma membrane 31.36 32.99
Solyc06g060620.2.1 Tomato plasma membrane 31.69 32.6
TraesCS2B01G277600.1 Wheat plasma membrane 30.71 32.41
Solyc01g096880.2.1 Tomato plasma membrane 30.54 32.4
TraesCS5D01G398000.1 Wheat plasma membrane 30.71 32.19
Os11t0284300-00 Rice mitochondrion 16.42 31.75
Os11t0283500-01 Rice plasma membrane 30.38 31.73
Os11t0282800-00 Rice plasma membrane 31.03 31.34
Solyc03g113250.2.1 Tomato plasma membrane 31.36 31.31
TraesCS5B01G393100.1 Wheat plasma membrane 23.32 29.4
TraesCS2A01G350000.1 Wheat plasma membrane 25.29 28.47
Zm00001d025748_P001 Maize plasma membrane 25.12 27.87
EES12425 Sorghum plasma membrane 24.79 27.76
TraesCS2D01G348400.1 Wheat plasma membrane 24.96 27.64
TraesCS2B01G368500.1 Wheat plasma membrane 24.96 27.64
TraesCS2B01G368400.1 Wheat plasma membrane 24.63 27.27
Solyc08g061020.1.1 Tomato plasma membrane 12.64 25.67
HORVU2Hr1G085260.3 Barley plasma membrane 20.03 23.78
Os04t0491200-00 Rice plasma membrane, vacuole 21.02 19.54
Os04t0491350-00 Rice plasma membrane 0.16 0.22
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:IPR020846
UniProt:K4B1G4InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654
PANTHER:PTHR11654:SF110SUPFAM:SSF103473EnsemblPlantsGene:Solyc01g102360.1EnsemblPlants:Solyc01g102360.1.1TMHMM:TMhelixUniParc:UPI0002767C55
SEG:seg:::::
Description
No Description!
Coordinates
chr1:-:91195028..91197626
Molecular Weight (calculated)
67272.3 Da
IEP (calculated)
9.149
GRAVY (calculated)
0.325
Length
609 amino acids
Sequence
(BLAST)
001: MEEGKITEYN SVSSSKVQRK GGFRATSFIF GLLGLENMGF VAVMVSFGLY FSFVMGFDLS GSANTLTNLM GSTFLLSILG GFISDTYINR FHTVLIFGPF
101: EIIAFALITI QAHYKSLQPI CLEPNCISGK KAMFFYASLC CFALGGGAVK GALPALGADQ FDQKDPKEAK ALGRYFNFLM FSSVIGGAFG VTFVVYVSTV
201: KAWWKGFLIS LVSVTLGFIF FAFGKPFFRL QQPAGSPLTR IFQVIVVAIN NGKLQLPENS EELYEISEKE SDSSQSKLAH TKQFRFLDKA AIHPKTGEPA
301: PWTVCTVTQV EEVKVLTRML PIIASTIIMN TCMAQLQTFS VAQGYRMNRF INKFEVPAPS VPAIPLIFMC ILIPIYDMVF VPFARKITKH PSGITQLQRV
401: GVGLVLSIVS MAVAALVEIK RKHHSLKDPL HPIHLAWLGF QYSIFGIADM FTLVGLLEFF YKEAPVGMRS LSTSFTWISI SLGFFLSSVL VDIINSVTKK
501: RAPSKKGWLV GLDLDQNNLH LFYWFLAILS GLNFLNYLYW ASWYKYKTDE IVEPKTKPNL GDSISLSKSV SVSGVPLLKP SESTNAMPTI EESSNGPTEE
601: ANENSAAAS
Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)
001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
Arabidopsis Description
NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.