Factsheet for TraesCS5D01G067400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G056200.2	Wheat	plasma membrane	98.4	98.22
TraesCS5B01G060500.1	Wheat	plasma membrane	97.68	97.86
TraesCS5D01G067100.1	Wheat	plasma membrane	93.4	93.4
TraesCS2D01G348500.1	Wheat	plasma membrane	79.32	79.61
Zm00001d003208_P001	Maize	plasma membrane	64.88	79.3
OQU81851	Sorghum	plasma membrane	77.9	77.62
TraesCS2D01G348600.1	Wheat	plasma membrane	76.83	77.1
Os04t0491500-02	Rice	plasma membrane	72.55	73.07
KXG26617	Sorghum	plasma membrane	76.47	72.84
TraesCS5D01G398000.1	Wheat	plasma membrane	52.76	50.95
TraesCS2D01G259400.2	Wheat	plasma membrane	52.41	50.78
TraesCS2D01G348400.1	Wheat	plasma membrane	38.68	39.45
KRH51937	Soybean	plasma membrane	38.15	37.41
Os04t0491200-00	Rice	plasma membrane, vacuole	42.42	36.34
TraesCS7D01G357300.2	Wheat	plasma membrane	39.75	36.08
Solyc04g079510.1.1	Tomato	plasma membrane	36.01	35.38
KRH19434	Soybean	plasma membrane	37.08	35.25
PGSC0003DMT400030533	Potato	plasma membrane	36.54	35.22
KRH02511	Soybean	plasma membrane	37.25	35.19
Solyc04g079520.2.1	Tomato	plasma membrane	36.36	35.05
KRH61236	Soybean	plasma membrane	37.97	34.8
KRG96656	Soybean	plasma membrane	35.65	34.72
Solyc10g039290.1.1	Tomato	plasma membrane	35.12	34.44
PGSC0003DMT400030534	Potato	plasma membrane	35.83	34.36
KRH33721	Soybean	plasma membrane	36.9	34.27
KRH68384	Soybean	plasma membrane	35.47	34.19
KRG90426	Soybean	plasma membrane	36.54	34.11
Solyc04g079530.2.1	Tomato	plasma membrane	35.12	34.02
PGSC0003DMT400011063	Potato	cytosol	35.12	33.79
PGSC0003DMT400030530	Potato	mitochondrion	21.03	33.62
TraesCS2D01G307400.1	Wheat	plasma membrane	34.76	33.51
PGSC0003DMT400054593	Potato	plasma membrane	36.36	33.22
Solyc01g102360.1.1	Tomato	plasma membrane	36.01	33.17
PGSC0003DMT400046950	Potato	plasma membrane	35.83	32.9
VIT_14s0060g00220.t01	Wine grape	plasma membrane	36.01	32.69
TraesCS4D01G087900.1	Wheat	golgi, peroxisome, plasma membrane	34.76	32.23
TraesCS2D01G327000.1	Wheat	plasma membrane	31.19	30.97
VIT_18s0001g11280.t01	Wine grape	plastid	34.94	30.82
TraesCS1D01G032700.1	Wheat	peroxisome	31.73	30.58
TraesCS7D01G297000.1	Wheat	plasma membrane	32.8	30.51
TraesCS5D01G419200.2	Wheat	plasma membrane	31.37	29.58
GSMUA_Achr11P...	Banana	plasma membrane	34.58	29.35
TraesCS4D01G361500.1	Wheat	peroxisome	31.55	29.21
TraesCS1D01G214300.1	Wheat	plasma membrane	29.77	28.07
TraesCS1D01G214200.1	Wheat	plasma membrane	29.77	28.02
TraesCS3D01G081100.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	32.09	27.52
Os04t0491350-00	Rice	plasma membrane	0.53	0.65

Protein Annotations

EnsemblPlants:TraesCS5D01G067400.1	EnsemblPlantsGene:TraesCS5D01G067400	Gene3D:1.20.1250.20	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:MFS_trans_sf
InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF104	PFAM:PF00854	SEG:seg	SUPFAM:SSF103473
TMHMM:TMhelix	MapMan:24.2.2.9	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:62519776..62522619

Molecular Weight (calculated)

61614.2 Da

IEP (calculated)

8.585

GRAVY (calculated)

0.407

Length

561 amino acids

Sequence
(BLAST)

001: MALGVFVNWR GNTINKEVHG GVRAAWFLYV LTVVTNVVIV PNLLNMVTYL HGTMHMGVSG SVTTAANFFG ATSGFAMIGA FLSDSYITRA RTMLLIGPFM
101: FLGYGLLALQ AYLPSLHPPA CNTEAELNNC KQVHGKNAAL LYVGLYLSAV GDGCIRSCLP SLGADQFDHE DPKESHQQSS FFNWYTFGIS FGGFVGLILI
201: VWLQNYKGWD VALGLCAVIV LLGLLVVAAG LPFYRNQVPQ GSPLTRILQV LVVAFRNRKT EVGEGLEETH ESSIEVGTGY IGSLSQTNSL KFLDKACINR
301: GKKGDWSVCS VTKVEETKIV LRFLPIFISS VIGYISNIIL FTFTVQQGGL TNTRLGKIHV SPATLFVIPI TFQMLMLAIY DQFIVPFLRR RTGYSGGITH
401: LQRIGIGFAS MILACVIAAV IEKKRKESAV QMSLFWLAPQ FFLLGVSDVT SFTGLLEFFN SEAPRGMKSI GTALFWCDLG LASLMATFLV DAVNGATRHG
501: HRAGWLEGAS LNTSHLDWFY WVVAVVGLLG FFNYLYWANK YVYQNNQRVA NVAPTVDQDS P

Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)

001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS

Arabidopsis Description

NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.