Factsheet for VIT_18s0001g11280.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
peroxisome 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51937	Soybean	plasma membrane	67.61	75.17
KRH61236	Soybean	plasma membrane	68.55	71.24
Solyc04g079510.1.1	Tomato	plasma membrane	61.64	68.65
PGSC0003DMT400030534	Potato	plasma membrane	61.64	67.01
PGSC0003DMT400030533	Potato	plasma membrane	58.18	63.57
Solyc04g079530.2.1	Tomato	plasma membrane	57.7	63.39
Solyc04g079520.2.1	Tomato	plasma membrane	57.7	63.06
PGSC0003DMT400030530	Potato	mitochondrion	34.75	62.96
VIT_14s0060g00220.t01	Wine grape	plasma membrane	45.91	47.25
VIT_01s0026g01570.t01	Wine grape	plasma membrane	38.05	41.37
VIT_17s0000g05640.t01	Wine grape	cytosol, plasma membrane, plastid	39.31	40.98
Zm00001d004621_P001	Maize	plasma membrane	29.72	38.89
HORVU5Hr1G095020.1	Barley	plasma membrane	35.06	38.18
TraesCS5A01G388000.1	Wheat	plasma membrane	34.91	38.14
VIT_11s0016g05170.t01	Wine grape	plasma membrane	34.28	37.85
EES15875	Sorghum	plasma membrane	33.8	37.79
EES15876	Sorghum	plasma membrane	33.33	37.72
OQU83318	Sorghum	mitochondrion, plasma membrane	30.19	37.43
VIT_12s0035g01820.t01	Wine grape	golgi, peroxisome, plasma membrane	35.69	37.21
Zm00001d041163_P001	Maize	plasma membrane	33.65	37.15
EES15877	Sorghum	plasma membrane	33.33	37.06
TraesCS5A01G056100.1	Wheat	plasma membrane	27.67	37.05
TraesCS2D01G259400.2	Wheat	plasma membrane	33.33	36.61
TraesCS5D01G398000.1	Wheat	plasma membrane	33.33	36.49
TraesCS2A01G264500.1	Wheat	plasma membrane	33.18	36.44
KXG28299	Sorghum	plasma membrane	33.02	36.4
Os04t0491500-02	Rice	plasma membrane	31.76	36.27
TraesCS2A01G350300.1	Wheat	plasma membrane	30.19	36.16
TraesCS2B01G277600.1	Wheat	plasma membrane	32.7	36.05
OQU81850	Sorghum	plasma membrane	31.13	36.0
HORVU2Hr1G062730.7	Barley	plasma membrane	32.7	35.99
Zm00001d003208_P001	Maize	plasma membrane	25.94	35.95
TraesCS5B01G060800.1	Wheat	plasma membrane	31.6	35.83
Os11t0283500-01	Rice	plasma membrane	32.7	35.68
TraesCS2A01G350100.1	Wheat	plasma membrane	31.29	35.6
TraesCS2B01G368700.1	Wheat	plasma membrane	31.29	35.6
VIT_11s0016g05180.t01	Wine grape	plasma membrane	32.7	35.56
OQU81851	Sorghum	plasma membrane	31.45	35.52
TraesCS5D01G067100.1	Wheat	plasma membrane	31.29	35.47
HORVU2Hr1G085210.21	Barley	plasma membrane	31.29	35.47
TraesCS5A01G056200.2	Wheat	plasma membrane	31.29	35.41
Os12t0231000-01	Rice	plasma membrane	32.39	35.33
TraesCS2D01G348500.1	Wheat	plasma membrane	30.97	35.24
TraesCS2D01G348600.1	Wheat	plasma membrane	30.97	35.24
TraesCS5B01G060500.1	Wheat	plasma membrane	30.97	35.18
TraesCS5D01G067400.1	Wheat	plasma membrane	30.82	34.94
EES14657	Sorghum	plasma membrane	31.29	34.91
Os11t0282800-00	Rice	plasma membrane	32.55	34.33
KXG26617	Sorghum	plasma membrane	31.76	34.3
Os11t0284300-00	Rice	mitochondrion	16.98	34.29
EES11151	Sorghum	plasma membrane	31.29	34.19
TraesCS2B01G368600.2	Wheat	plasma membrane	30.82	33.73
VIT_02s0154g00260.t01	Wine grape	plastid	34.12	33.7
TraesCS5B01G393100.1	Wheat	plasma membrane	25.31	33.33
HORVU2Hr1G007730.1	Barley	mitochondrion	18.24	32.95
VIT_12s0059g01240.t01	Wine grape	plastid	33.49	32.82
VIT_02s0087g00580.t01	Wine grape	plasma membrane	15.09	32.43
TraesCS2A01G350000.1	Wheat	plasma membrane	27.36	32.16
VIT_01s0150g00250.t01	Wine grape	cytosol, peroxisome, plasma membrane	31.6	31.41
TraesCS2D01G348400.1	Wheat	plasma membrane	27.04	31.27
TraesCS2B01G368500.1	Wheat	plasma membrane	26.89	31.09
TraesCS2B01G368400.1	Wheat	plasma membrane	26.73	30.91
Zm00001d025748_P001	Maize	plasma membrane	25.94	30.05
EES12425	Sorghum	plasma membrane	25.63	29.96
VIT_18s0089g01010.t01	Wine grape	plasma membrane	38.99	27.4
HORVU2Hr1G085260.3	Barley	plasma membrane	19.65	24.37
Os04t0491200-00	Rice	plasma membrane, vacuole	20.28	19.69
Os04t0491350-00	Rice	plasma membrane	0.47	0.65

Protein Annotations

EntrezGene:100267755	wikigene:100267755	MapMan:24.2.2.9	ProteinID:CBI19585	ProteinID:CBI19585.3	UniProt:E0CPC8
EMBL:FN595227	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EntrezGene:LOC100267755	wikigene:LOC100267755
InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF113	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI0001BE1A24	ArrayExpress:VIT_18s0001g11280	EnsemblPlantsGene:VIT_18s0001g11280	EnsemblPlants:VIT_18s0001g11280.t01	unigene:Vvi.24223
RefSeq:XP_002282221	RefSeq:XP_002282221.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr18:+:9597349..9600920

Molecular Weight (calculated)

70398.1 Da

IEP (calculated)

9.006

GRAVY (calculated)

0.316

Length

636 amino acids

Sequence
(BLAST)

001: MQQLSQLIKS SYTHWLLHSS VYKASGFTRL NTTLQLSEKK KTEGKIGLAF WVTGESSQHR MGICRDAKTG PRREAMTGGT RAAIFVYAME GLENMAYVAN
101: AVSLVTYFYG YMNFSLTKSA TTLTNFMGTS LLLTLLGGFI CDTYLSRFKT CVLFGCIELV GYALLTVQAH FSQLRPFPCK NVARDKMDQC EAADSGQVAI
201: LFTGLYLVAL GTSGVKAALP ALGADQFDEK DPKEAPLIST FFNWFLFSLT VGAIFGVTFV VWISSNQGWD LAFGVSTLVV LFSIIFLCMG KSVYRHNAPK
301: GSPILRIVQV FVAAIRNRAL PVPEKSEELH EIHDKEVGME NEILARTDQF RFLDRAAIVS TASGTSPSIT PRPWRMCTVT QVEETKILIR MLPIILSTFF
401: MNTCLAQLQT FSIQQSTTMD RNLLGFQVPG PSIPLIPLLF MFILIPIYER IFVPLARKVT GIPTGIRHLQ RIAIGLVLST ISMAVAGVVE TRRKSAAIQH
501: NMVDSPDPLP ISVFWLGFQY AIFGAADMFT LVGLLEFFYA ESSLGMKSLS TAIAWCSVAF GYFTSTIVVE VVNRVSGGWL ASNNLNRDKL NYFYWLLAGL
601: SVVNFGVYLV CASWYRYKKV EVKQLGSSAG DDEGKA

Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)

001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS

Arabidopsis Description

NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.