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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plasma membrane, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:mitochondrion
Predotar:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d003208_P001 Maize plasma membrane 64.2 49.24
HORVU2Hr1G085210.21 Barley plasma membrane 73.01 45.81
TraesCS2D01G348600.1 Wheat plasma membrane 71.31 44.9
TraesCS2B01G368700.1 Wheat plasma membrane 71.31 44.9
OQU81851 Sorghum plasma membrane 68.18 42.63
TraesCS2A01G350300.1 Wheat plasma membrane 62.22 41.24
KXG26617 Sorghum plasma membrane 66.76 39.9
HORVU2Hr1G081050.1 Barley endoplasmic reticulum, extracellular 6.82 34.78
PGSC0003DMT400030530 Potato mitochondrion 29.55 29.63
HORVU2Hr1G098210.2 Barley mitochondrion, plasma membrane 25.57 29.32
HORVU5Hr1G095020.1 Barley plasma membrane 48.3 29.11
HORVU2Hr1G062730.7 Barley plasma membrane 46.31 28.2
HORVU3Hr1G071510.1 Barley golgi, plasma membrane 38.07 23.47
KRG96656 Soybean plasma membrane 36.36 22.22
KRH68384 Soybean plasma membrane 36.08 21.82
KRH33721 Soybean plasma membrane 36.65 21.36
KRG90426 Soybean plasma membrane 36.36 21.3
PGSC0003DMT400046950 Potato plasma membrane 36.93 21.28
Solyc04g079510.1.1 Tomato plasma membrane 34.38 21.19
Solyc01g102360.1.1 Tomato plasma membrane 36.65 21.18
PGSC0003DMT400030534 Potato plasma membrane 34.38 20.68
KRH51937 Soybean plasma membrane 33.52 20.63
Solyc04g079520.2.1 Tomato plasma membrane 33.81 20.45
Solyc10g039290.1.1 Tomato plasma membrane 32.95 20.28
PGSC0003DMT400030533 Potato plasma membrane 33.52 20.27
PGSC0003DMT400011063 Potato cytosol 33.52 20.24
KRH02511 Soybean plasma membrane 33.24 19.7
Solyc04g079530.2.1 Tomato plasma membrane 32.39 19.69
KRH19434 Soybean plasma membrane 32.95 19.66
VIT_14s0060g00220.t01 Wine grape plasma membrane 34.09 19.42
KRH61236 Soybean plasma membrane 33.24 19.12
PGSC0003DMT400054593 Potato plasma membrane 32.1 18.4
VIT_18s0001g11280.t01 Wine grape plastid 32.95 18.24
HORVU7Hr1G086170.5 Barley cytosol, peroxisome, plastid 32.39 18.07
HORVU4Hr1G015640.2 Barley golgi, peroxisome, plasma membrane 29.55 17.25
HORVU1Hr1G004720.4 Barley plasma membrane 28.12 17.16
HORVU5Hr1G099170.6 Barley plasma membrane 29.55 17.05
HORVU1Hr1G054020.3 Barley mitochondrion, peroxisome, plastid 26.14 16.85
HORVU7Hr1G071600.2 Barley mitochondrion 28.41 16.1
HORVU3Hr1G014510.3 Barley plastid 29.26 15.8
HORVU1Hr1G053990.4 Barley peroxisome 27.27 15.56
HORVU4Hr1G088020.4 Barley nucleus, plasma membrane 26.99 15.3
GSMUA_Achr11P... Banana plasma membrane 27.27 14.52
HORVU2Hr1G085260.3 Barley plasma membrane 18.47 12.67
HORVU2Hr1G076880.23 Barley golgi, peroxisome 11.65 6.98
HORVU2Hr1G065480.1 Barley golgi, plasma membrane 2.27 3.56
Protein Annotations
EnsemblPlants:HORVU2Hr1G007730.1EnsemblPlantsGene:HORVU2Hr1G007730Gene3D:1.20.1250.20GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:MFS_trans_sfInterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF104PFAM:PF00854SUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI000B478558UniProt:A0A287H0D9MapMan:24.2.2.9::
Description
No Description!
Coordinates
chrchr2H:-:16113745..16117930
Molecular Weight (calculated)
39174.1 Da
IEP (calculated)
9.779
GRAVY (calculated)
0.302
Length
352 amino acids
Sequence
(BLAST)
001: MGYRIWGVCH LNSAWIARSC CWPPFLSQPS TKRKSSNSNT AGSGVVAFRN RKLEHPENLE EALESSAGTM TSSIDKLSQT KTLKFLDKAC INRGENGAWS
101: VCSVTKVEET KIVLRLLPLF ISSMISYVPT IIIFTFTVQQ GGMTNTRLGK IHVSPATLFI IPTIFQLIML AVYDQFLVPF LRRCTGYVGG VTHLQRVAIG
201: FASMLLASVI AAIVEKKRKQ VVVPMSLFWL APQFFLLGVA DVTSFTGLLE FFNAESPRGM KSIAIALLWC EVGLASLMST LLVKTVNIAT RHEQHGGWLE
301: GTSLNNSHLD LFYWVVAILG LLGFFNYLYW AKKYVYQHNP RIVEATANQG SF
Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)
001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
Arabidopsis Description
NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.