Factsheet for HORVU4Hr1G015640.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

golgi 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	golgi, plasma membrane
MultiLoc:	golgi
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G087900.1	Wheat	golgi, peroxisome, plasma membrane	95.52	95.21
TraesCS4B01G090800.1	Wheat	golgi, peroxisome, plasma membrane	95.19	95.03
TraesCS4A01G225400.1	Wheat	golgi, peroxisome, plasma membrane, plastid	95.19	94.72
OQU83190	Sorghum	plasma membrane	77.78	82.86
Os11t0235200-01	Rice	plasma membrane	83.58	80.51
Zm00001d007255_P001	Maize	plasma membrane	79.6	77.05
GSMUA_Achr10P...	Banana	plasma membrane	68.33	73.05
GSMUA_Achr6P07370_001	Banana	plasma membrane	66.17	71.25
GSMUA_Achr5P16920_001	Banana	plasma membrane	65.34	70.74
GSMUA_Achr9P08330_001	Banana	plasma membrane	66.67	68.84
GSMUA_Achr6P29080_001	Banana	plasma membrane	67.16	68.64
GSMUA_AchrUn_...	Banana	plasma membrane	20.73	67.57
Solyc11g042820.1.1	Tomato	peroxisome, plasma membrane, vacuole	64.51	65.6
CDX93764	Canola	plasma membrane	64.01	64.33
Bra028002.1-P	Field mustard	peroxisome	63.85	64.17
AT1G33440.1	Thale cress	plasma membrane	63.68	63.89
CDY50182	Canola	plasma membrane	62.19	63.78
PGSC0003DMT400082762	Potato	plasma membrane	46.1	61.5
GSMUA_Achr8P29280_001	Banana	plasma membrane	64.68	61.22
VIT_18s0089g01010.t01	Wine grape	plasma membrane	67.83	45.19
HORVU2Hr1G076880.23	Barley	golgi, peroxisome	42.95	44.12
HORVU2Hr1G081050.1	Barley	endoplasmic reticulum, extracellular	4.31	37.68
HORVU3Hr1G071510.1	Barley	golgi, plasma membrane	35.49	37.48
HORVU2Hr1G085210.21	Barley	plasma membrane	33.17	35.65
HORVU2Hr1G062730.7	Barley	plasma membrane	33.33	34.78
HORVU7Hr1G086170.5	Barley	cytosol, peroxisome, plastid	36.15	34.55
HORVU5Hr1G099170.6	Barley	plasma membrane	34.83	34.43
HORVU4Hr1G088020.4	Barley	nucleus, plasma membrane	35.32	34.3
HORVU1Hr1G004720.4	Barley	plasma membrane	32.17	33.62
HORVU5Hr1G095020.1	Barley	plasma membrane	32.5	33.56
HORVU7Hr1G071600.2	Barley	mitochondrion	34.16	33.17
HORVU1Hr1G053990.4	Barley	peroxisome	33.66	32.9
HORVU2Hr1G098210.2	Barley	mitochondrion, plasma membrane	16.58	32.57
HORVU2Hr1G065480.1	Barley	golgi, plasma membrane	11.11	29.78
HORVU2Hr1G007730.1	Barley	mitochondrion	17.25	29.55
HORVU3Hr1G014510.3	Barley	plastid	30.51	28.22
HORVU1Hr1G054020.3	Barley	mitochondrion, peroxisome, plastid	25.04	27.66
HORVU2Hr1G085260.3	Barley	plasma membrane	21.56	25.34

Protein Annotations

MapMan:24.2.2.9	EMBL:AK366567	UniProt:F2DRP9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:HORVU4Hr1G015640	EnsemblPlants:HORVU4Hr1G015640.2	InterPro:MFS_trans_sf	PFAM:PF00854
InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF198	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0002006E7C
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DRP9]

Coordinates

chrchr4H:-:61671022..61677145

Molecular Weight (calculated)

65105.0 Da

IEP (calculated)

7.743

GRAVY (calculated)

0.388

Length

603 amino acids

Sequence
(BLAST)

001: MDVESSRQQG PKGDSNSMAA ASEVSVDWRG RPCKPHKHGG MKAAVFVLGI QAFEIMAIAA VGNNLITYVF NEMHFPLSKS ANIVTNFIGT MFLLSLLGGF
101: LSDSYLGSFW TMLIFGFVEL SGFILLAVQA HLPQLRPPAC DMRAAGQCEE VGGVKAGIFF AALYLVALGS GCLKPNIIAH GADQFRRDGE EGAVDGGKRL
201: SSYFNAAYFS FCVGEMVALT VLVWVQTRSG MDVGFGVSAA AMAVGLVSLV AGVFFYRNKP PQGSICTPIA KVFVAAVANR KQVCPSSMAT LQDIACTGAH
301: EICLNTTNIC RINKFRFLDK ACLKAQDGGN KDSGWGLCTA AEVEQVKVLL CVVPIFACTI VFNTILAQLQ TFSVQQGSAM DTRLAANFHV PPASLQAIPY
401: VMLIALVPAY EAVFVPTVRR FTGVGTGITP LQRIGVGLFT VTFSMVAAAL VEARRRHSSV YGDGRALSIF WIAPQFLVFG LSEMFTAVGL IEFFYKQSLS
501: GMQAFLTSMT YCSYSFGFYL SSVLVSLVNR VTSRNGGNGW LSNNDLDKDR LDLFYWLLAA LSILNFFNFL FWSRWYSNSV DTVQVAGVGG DGGSEQEDEK
601: GSA

Best Arabidopsis Sequence Match ( AT1G59740.1 )
(BLAST)

001: MAEINKQSNK WEQEEVSNEN NWELAEEESV DWRGRPSNPN KHGGMRAALF VLGLQAFEIM GIAAVGNNLI TYVINEMHFP LSKAANIVTN FVGTIFIFAL
101: LGGYLSDAFL GSFWTIIIFG FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN MIAHGADQFS QSHPKQSKRL
201: SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND
301: VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM
401: LIFLVPLYDS FLVPFARKLT GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE MFTAVGLIEF FYKQSAKGME
501: SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I

Arabidopsis Description

NPF4.3Protein NRT1/ PTR FAMILY 4.3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VV5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.