Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G060350.5 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12110.1 | HORVU2Hr1G060350.5 | AT1G30270.1 | 19766570 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G224900.1 | Wheat | plasma membrane | 93.84 | 97.15 |
| TraesCS1D01G214200.1 | Wheat | plasma membrane | 93.84 | 97.15 |
| TraesCS1A01G210900.1 | Wheat | plasma membrane | 75.53 | 96.48 |
| Os10t0554200-02 | Rice | plasma membrane | 82.5 | 85.4 |
| Zm00001d029932_P001 | Maize | plasma membrane | 81.04 | 84.03 |
| EER91957 | Sorghum | plasma membrane | 80.39 | 83.36 |
| Zm00001d029933_P001 | Maize | cytosol, peroxisome, plasma membrane | 79.25 | 83.16 |
| HORVU1Hr1G054020.3 | Barley | mitochondrion, peroxisome, plastid | 63.7 | 71.98 |
| HORVU4Hr1G088020.4 | Barley | nucleus, plasma membrane | 69.21 | 68.76 |
| GSMUA_Achr8P11190_001 | Banana | peroxisome | 62.56 | 68.32 |
| GSMUA_Achr11P... | Banana | plasma membrane | 62.56 | 68.08 |
| GSMUA_Achr8P11180_001 | Banana | peroxisome | 61.91 | 67.14 |
| KRH28055 | Soybean | plasma membrane | 62.4 | 65.7 |
| KRH77380 | Soybean | cytosol, plasma membrane, plastid | 61.75 | 65.02 |
| PGSC0003DMT400012226 | Potato | cytosol, peroxisome, plasma membrane | 61.75 | 64.58 |
| GSMUA_Achr11P... | Banana | peroxisome | 58.67 | 64.3 |
| Solyc08g078950.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 61.43 | 64.24 |
| CDY30051 | Canola | cytosol, peroxisome, plasma membrane | 36.3 | 64.18 |
| HORVU7Hr1G071600.2 | Barley | mitochondrion | 63.21 | 62.8 |
| PGSC0003DMT400032493 | Potato | cytosol, peroxisome, plasma membrane | 59.81 | 62.54 |
| Solyc08g007430.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 59.64 | 62.37 |
| CDY15967 | Canola | plasma membrane | 57.37 | 61.67 |
| CDY26539 | Canola | plasma membrane | 57.21 | 61.5 |
| CDY69100 | Canola | plasma membrane | 33.06 | 61.45 |
| AT1G12110.1 | Thale cress | plasma membrane | 58.67 | 61.36 |
| Bra026991.1-P | Field mustard | plasma membrane | 58.51 | 61.29 |
| KRH04097 | Soybean | peroxisome | 59.0 | 61.28 |
| CDY21035 | Canola | plasma membrane | 56.73 | 60.87 |
| Bra016789.1-P | Field mustard | plasma membrane | 58.18 | 60.85 |
| Bra019744.1-P | Field mustard | plasma membrane | 26.42 | 60.82 |
| CDY31242 | Canola | plasma membrane | 56.4 | 60.52 |
| VIT_02s0154g00260.t01 | Wine grape | plastid | 62.88 | 60.25 |
| Solyc06g060620.2.1 | Tomato | plasma membrane | 56.89 | 59.29 |
| KRH57369 | Soybean | plasma membrane | 56.24 | 58.81 |
| PGSC0003DMT400035882 | Potato | plasma membrane | 56.08 | 58.45 |
| HORVU1Hr1G004720.4 | Barley | plasma membrane | 47.16 | 50.43 |
| HORVU5Hr1G099170.6 | Barley | plasma membrane | 46.19 | 46.72 |
| HORVU2Hr1G065480.1 | Barley | golgi, plasma membrane | 16.53 | 45.33 |
| HORVU2Hr1G081050.1 | Barley | endoplasmic reticulum, extracellular | 4.38 | 39.13 |
| HORVU3Hr1G071510.1 | Barley | golgi, plasma membrane | 32.9 | 35.55 |
| HORVU7Hr1G086170.5 | Barley | cytosol, peroxisome, plastid | 35.01 | 34.23 |
| HORVU4Hr1G015640.2 | Barley | golgi, peroxisome, plasma membrane | 32.9 | 33.66 |
| HORVU5Hr1G095020.1 | Barley | plasma membrane | 31.44 | 33.22 |
| HORVU3Hr1G014510.3 | Barley | plastid | 34.68 | 32.82 |
| HORVU2Hr1G062730.7 | Barley | plasma membrane | 29.17 | 31.14 |
| HORVU2Hr1G085210.21 | Barley | plasma membrane | 28.04 | 30.84 |
| HORVU2Hr1G098210.2 | Barley | mitochondrion, plasma membrane | 14.91 | 29.97 |
| HORVU2Hr1G007730.1 | Barley | mitochondrion | 15.56 | 27.27 |
| HORVU2Hr1G085260.3 | Barley | plasma membrane | 19.12 | 23.0 |
| HORVU2Hr1G076880.23 | Barley | golgi, peroxisome | 21.07 | 22.15 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | UniProt:A0A287FMU9 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006857 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | EnsemblPlantsGene:HORVU1Hr1G053990 | EnsemblPlants:HORVU1Hr1G053990.4 | InterPro:MFS_trans_sf | PFAM:PF00854 | InterPro:POT_fam |
| ScanProsite:PS01022 | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF136 | InterPro:PTR2_symporter_CS | SUPFAM:SSF103473 | TMHMM:TMhelix |
| UniParc:UPI000B46B767 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:398804734..398808074
Molecular Weight (calculated)
66141.8 Da
IEP (calculated)
8.093
GRAVY (calculated)
0.330
Length
617 amino acids
Sequence
(BLAST)
(BLAST)
001: LPHSGKRAQE RERGGSPSLV TMGSVLPEIV AEGKGILTDA WDSKGRPAAR STTGGWGCAA MILGAELFER MTTLGIAVNL VPYMTGTMHL GSAAAANTVT
101: NFIGTSFMLC LLGGFVADTY LGRYLTIAVF SAVQATGVMV LTISTVAPGL RPAACGDVTG QSPECVPANG TQLGVLYLGL YMTALGTGGL KSSVSGFGSD
201: QFDESDDGER KKMMRFFNWF YFFVSIGALL AVTVLVYVQD NIGRRWGYGI CAVGILAGLG VFLCGTKMYR FKKLVGSPLT QVAAVTTAAW SKRALPLPSD
301: PSMLYDVDDA AAAGEDLKGK QKLPHSKECR FLDHAAIIDR AEAASPAEAS KWTLCTRTDV EEVKQVVRML PIWATTIMFW TIHAQMTTFA VEQASLMDRG
401: IGGSGFLIPA GSLTVFLIGS ILLTVPLYDR LIAPVARRIT GNPHGLSPLQ RVFVGLFLSI VGMAAAAIVE RHRLTSSTHG ITLTVFLLMP QFLLVGAGEA
501: FTYMGQLDFF LRECPKGMKT MSTGLFLSTC ALGFFFSTVT VTIVHKVTGH GPRGSGGWLA DNLDQGRLDY FYWLLAVMSA INIVFFTMAA RGYVYKEKRL
601: ADAGIELADE EGLGARE
101: NFIGTSFMLC LLGGFVADTY LGRYLTIAVF SAVQATGVMV LTISTVAPGL RPAACGDVTG QSPECVPANG TQLGVLYLGL YMTALGTGGL KSSVSGFGSD
201: QFDESDDGER KKMMRFFNWF YFFVSIGALL AVTVLVYVQD NIGRRWGYGI CAVGILAGLG VFLCGTKMYR FKKLVGSPLT QVAAVTTAAW SKRALPLPSD
301: PSMLYDVDDA AAAGEDLKGK QKLPHSKECR FLDHAAIIDR AEAASPAEAS KWTLCTRTDV EEVKQVVRML PIWATTIMFW TIHAQMTTFA VEQASLMDRG
401: IGGSGFLIPA GSLTVFLIGS ILLTVPLYDR LIAPVARRIT GNPHGLSPLQ RVFVGLFLSI VGMAAAAIVE RHRLTSSTHG ITLTVFLLMP QFLLVGAGEA
501: FTYMGQLDFF LRECPKGMKT MSTGLFLSTC ALGFFFSTVT VTIVHKVTGH GPRGSGGWLA DNLDQGRLDY FYWLLAVMSA INIVFFTMAA RGYVYKEKRL
601: ADAGIELADE EGLGARE
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.