Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d018799_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12110.1 | Zm00001d018799_P001 | AT1G30270.1 | 19766570 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91957 | Sorghum | plasma membrane | 93.11 | 93.11 |
| Zm00001d029933_P001 | Maize | cytosol, peroxisome, plasma membrane | 89.41 | 90.48 |
| Os10t0554200-02 | Rice | plasma membrane | 87.39 | 87.25 |
| TraesCS1A01G211000.1 | Wheat | cytosol | 84.71 | 84.71 |
| TraesCS1D01G214200.1 | Wheat | plasma membrane | 84.54 | 84.4 |
| TraesCS1B01G225000.1 | Wheat | plasma membrane | 84.37 | 84.37 |
| TraesCS1D01G214300.1 | Wheat | plasma membrane | 84.37 | 84.37 |
| TraesCS1A01G210900.1 | Wheat | plasma membrane | 68.4 | 84.27 |
| TraesCS1B01G224900.1 | Wheat | plasma membrane | 84.37 | 84.23 |
| HORVU1Hr1G053990.4 | Barley | peroxisome | 84.03 | 81.04 |
| Zm00001d027285_P001 | Maize | cytosol, plasma membrane, vacuole | 71.09 | 70.5 |
| HORVU1Hr1G054020.3 | Barley | mitochondrion, peroxisome, plastid | 62.86 | 68.5 |
| GSMUA_Achr8P11190_001 | Banana | peroxisome | 64.87 | 68.32 |
| GSMUA_Achr11P... | Banana | plasma membrane | 64.71 | 67.9 |
| GSMUA_Achr8P11180_001 | Banana | peroxisome | 64.71 | 67.66 |
| Zm00001d024587_P001 | Maize | plasma membrane | 67.73 | 66.28 |
| KRH28055 | Soybean | plasma membrane | 64.87 | 65.87 |
| KRH77380 | Soybean | cytosol, plasma membrane, plastid | 64.87 | 65.87 |
| CDY30051 | Canola | cytosol, peroxisome, plasma membrane | 37.65 | 64.18 |
| PGSC0003DMT400012226 | Potato | cytosol, peroxisome, plasma membrane | 63.19 | 63.73 |
| Solyc08g078950.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 63.19 | 63.73 |
| GSMUA_Achr11P... | Banana | peroxisome | 59.66 | 63.06 |
| Bra019744.1-P | Field mustard | plasma membrane | 28.24 | 62.69 |
| CDY15967 | Canola | plasma membrane | 60.34 | 62.54 |
| CDY26539 | Canola | plasma membrane | 60.17 | 62.37 |
| Bra026991.1-P | Field mustard | plasma membrane | 61.68 | 62.31 |
| KRH04097 | Soybean | peroxisome | 62.02 | 62.12 |
| CDY69100 | Canola | plasma membrane | 34.62 | 62.05 |
| PGSC0003DMT400032493 | Potato | cytosol, peroxisome, plasma membrane | 61.51 | 62.03 |
| Solyc08g007430.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 61.18 | 61.69 |
| AT1G12110.1 | Thale cress | plasma membrane | 61.18 | 61.69 |
| CDY21035 | Canola | plasma membrane | 59.33 | 61.39 |
| Bra016789.1-P | Field mustard | plasma membrane | 60.84 | 61.36 |
| CDY31242 | Canola | plasma membrane | 58.82 | 60.87 |
| VIT_02s0154g00260.t01 | Wine grape | plastid | 65.21 | 60.25 |
| Solyc06g060620.2.1 | Tomato | plasma membrane | 59.16 | 59.46 |
| KRH57369 | Soybean | plasma membrane | 58.66 | 59.15 |
| PGSC0003DMT400035882 | Potato | plasma membrane | 58.32 | 58.61 |
| Zm00001d044529_P001 | Maize | cytosol, peroxisome, plasma membrane | 51.09 | 51.44 |
| Zm00001d016982_P001 | Maize | plasma membrane | 50.42 | 50.34 |
| Zm00001d009399_P001 | Maize | cytosol, peroxisome, plasma membrane | 49.75 | 50.08 |
| Zm00001d036942_P001 | Maize | plasma membrane | 33.28 | 36.67 |
| Zm00001d003603_P001 | Maize | plasma membrane | 35.97 | 36.27 |
| Zm00001d046383_P001 | Maize | plasma membrane | 35.8 | 35.98 |
| Zm00001d043463_P001 | Maize | plasma membrane | 32.77 | 35.65 |
| Zm00001d036941_P001 | Maize | plasma membrane | 35.97 | 35.14 |
| Zm00001d007255_P001 | Maize | plasma membrane | 35.8 | 34.19 |
| Zm00001d040201_P001 | Maize | plasma membrane | 37.82 | 34.04 |
| Zm00001d041163_P001 | Maize | plasma membrane | 32.27 | 33.33 |
| Zm00001d003208_P001 | Maize | plasma membrane | 25.04 | 32.46 |
| Zm00001d004621_P001 | Maize | plasma membrane | 25.21 | 30.86 |
| Zm00001d049349_P001 | Maize | mitochondrion | 34.29 | 28.45 |
| Zm00001d025748_P001 | Maize | plasma membrane | 25.04 | 27.14 |
Protein Annotations
| EntrezGene:103637664 | MapMan:24.2.2.9 | UniProt:A0A096SQP7 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006857 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | InterPro:MFS_trans_sf | ProteinID:ONL99860.1 | PFAM:PF00854 | InterPro:POT_fam | ScanProsite:PS01022 |
| PANTHER:PTHR11654 | PANTHER:PTHR11654:SF136 | InterPro:PTR2_symporter_CS | SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI000221DB5D |
| EnsemblPlantsGene:Zm00001d029932 | EnsemblPlants:Zm00001d029932_P001 | EnsemblPlants:Zm00001d029932_T001 | SEG:seg | : | : |
Description
nitrate transporter/peptide transporter family2Protein NRT1/ PTR FAMILY 6.3
Coordinates
chr1:+:94940936..94945167
Molecular Weight (calculated)
63470.5 Da
IEP (calculated)
8.097
GRAVY (calculated)
0.435
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVLPDTAS DGKALTDAWD YKGRPASRAT TGGWACAAMI LGAELFERMT TLGIAVNLVP YMTGTMHLGN ASAANTVTNF IGASFMLCLL GGFVADTYLG
101: RYLTIAIFTA VQATGVMILT ISTAAPGLRP PACADAKGAS PDCVPANGTQ LGVLYLGLYL TALGTGGLKS SVSGFGSDQF DEAHGGERKR MLRFFNWFYF
201: FVSIGALLAV TVLVYVQDNV GRRWGYGICA VGILCGLGVF LLGTRRYRFR KLVGSPLTQV AAVTAAAWSK RALPLPSDPD MLYDVDDAAA AGADVKGKEK
301: LPHSKECRFL DHAAIVVVDG GGESSPAASK WALCTRTDVE EVKQVVRMLP IWATTIMFWT IHAQMTTFSV AQAEVMDRAL GGGSGFLIPA GSLTVFLIGS
401: ILLTVPVYDR LLAPLARRLT GNPHGLTPLQ RVFVGLLLSV AGMAVAALVE RHRQVASGHG ATLTVFLLMP QFVLVGAGEA FTYMGQLAFF LRECPKGMKT
501: MSTGLFLSTC ALGFFFSTLL VTIVHKVTAH AGRDGWLADN LDDGRLDYFY WLLAVISAIN LVLFTFAARG YVYKEKRLAD AGIELADEES IAVGH
101: RYLTIAIFTA VQATGVMILT ISTAAPGLRP PACADAKGAS PDCVPANGTQ LGVLYLGLYL TALGTGGLKS SVSGFGSDQF DEAHGGERKR MLRFFNWFYF
201: FVSIGALLAV TVLVYVQDNV GRRWGYGICA VGILCGLGVF LLGTRRYRFR KLVGSPLTQV AAVTAAAWSK RALPLPSDPD MLYDVDDAAA AGADVKGKEK
301: LPHSKECRFL DHAAIVVVDG GGESSPAASK WALCTRTDVE EVKQVVRMLP IWATTIMFWT IHAQMTTFSV AQAEVMDRAL GGGSGFLIPA GSLTVFLIGS
401: ILLTVPVYDR LLAPLARRLT GNPHGLTPLQ RVFVGLLLSV AGMAVAALVE RHRQVASGHG ATLTVFLLMP QFVLVGAGEA FTYMGQLAFF LRECPKGMKT
501: MSTGLFLSTC ALGFFFSTLL VTIVHKVTAH AGRDGWLADN LDDGRLDYFY WLLAVISAIN LVLFTFAARG YVYKEKRLAD AGIELADEES IAVGH
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.