Factsheet for Zm00001d016982_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05323	Sorghum	plasma membrane	90.6	90.45
Os02t0580900-01	Rice	plasma membrane	84.4	82.59
TraesCS5B01G414000.3	Wheat	plasma membrane	79.53	79.8
TraesCS5D01G419200.2	Wheat	plasma membrane	79.36	79.5
TraesCS5A01G409600.1	Wheat	plasma membrane	77.52	77.78
HORVU2Hr1G065480.1	Barley	golgi, plasma membrane	29.19	77.33
HORVU5Hr1G099170.6	Barley	plasma membrane	78.02	76.23
GSMUA_Achr3P05990_001	Banana	cytosol, plasma membrane, plastid	65.6	68.12
KRH73378	Soybean	cytosol, peroxisome, plasma membrane	64.09	64.97
KRH14759	Soybean	plasma membrane	63.93	64.91
Solyc12g006050.1.1	Tomato	cytosol, peroxisome, plasma membrane	62.92	63.34
Solyc07g049290.2.1	Tomato	nucleus	62.75	63.28
Bra023868.1-P	Field mustard	plasma membrane	61.24	63.15
PGSC0003DMT400001784	Potato	cytosol, peroxisome, plasma membrane	62.75	63.07
Bra031295.1-P	Field mustard	plasma membrane	61.74	63.01
AT3G21670.1	Thale cress	plasma membrane	62.08	62.71
PGSC0003DMT400010957	Potato	cytosol, peroxisome, plasma membrane	62.25	62.67
CDY44319	Canola	plasma membrane	48.83	61.78
CDY38629	Canola	plasma membrane	48.83	60.75
VIT_12s0059g01240.t01	Wine grape	plastid	65.27	59.94
VIT_02s0087g00580.t01	Wine grape	plasma membrane	27.85	56.08
Zm00001d029932_P001	Maize	plasma membrane	50.34	50.42
Zm00001d024587_P001	Maize	plasma membrane	51.34	50.33
Zm00001d029933_P001	Maize	cytosol, peroxisome, plasma membrane	47.99	48.64
Zm00001d027285_P001	Maize	cytosol, plasma membrane, vacuole	48.32	48.0
Zm00001d044529_P001	Maize	cytosol, peroxisome, plasma membrane	47.48	47.88
Zm00001d009399_P001	Maize	cytosol, peroxisome, plasma membrane	47.15	47.55
Zm00001d036942_P001	Maize	plasma membrane	34.23	37.78
Zm00001d003603_P001	Maize	plasma membrane	36.07	36.44
Zm00001d046383_P001	Maize	plasma membrane	35.91	36.15
Zm00001d036941_P001	Maize	plasma membrane	36.91	36.12
Zm00001d003208_P001	Maize	plasma membrane	26.51	34.42
Zm00001d043463_P001	Maize	plasma membrane	31.54	34.37
Zm00001d040201_P001	Maize	plasma membrane	38.09	34.34
Zm00001d007255_P001	Maize	plasma membrane	35.23	33.71
Zm00001d041163_P001	Maize	plasma membrane	32.21	33.33
Zm00001d004621_P001	Maize	plasma membrane	26.01	31.89
Zm00001d025748_P001	Maize	plasma membrane	25.67	27.87
Zm00001d049349_P001	Maize	mitochondrion	32.38	26.92

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100281564	MapMan:24.2.2.9	ProteinID:AQK72075.1	EMBL:BT067371	UniProt:C0PGF2
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam
PANTHER:PTHR11654	PANTHER:PTHR11654:SF154	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000195CB23	EnsemblPlantsGene:Zm00001d016982
EnsemblPlants:Zm00001d016982_P001	EnsemblPlants:Zm00001d016982_T001	SEG:seg	:	:	:

Description

Protein NRT1/ PTR FAMILY 6.4

Coordinates

chr5:-:181884079..181887305

Molecular Weight (calculated)

63340.9 Da

IEP (calculated)

9.598

GRAVY (calculated)

0.342

Length

596 amino acids

Sequence
(BLAST)

001: MVSGAGHGGY GGGDDGQAVD FRGNPADKSR TGGWLGAGLI LGTELAERVC VMGISMNLVT YLVGELHLSN SKSATVVTNF MGTLNLLALV GGFLADAKLG
101: RYLTIAISAT IAATGVSLLT VDTTVPSMRP PACLDARGPR AHECVPARGG QLALLYAALY TVAAGAGGLK ANVSGFGSDQ FDGRDPREER AMVFFFNRFY
201: FCVSLGSLFA VTVLVYVQDN VGRGWGYGVS AVAMALAVAV LVAGTPRYRY RRPQGSPLTA VGRVLAAAWR KRRLPLPADA AELHGFAAAK VAHTDRLRWL
301: DKAAIVEAEP AGKQRASAAA ASTVTEVEEV KMVAKLLPIW STCILFWTVY SQMTTFSVEQ ATRMDRHLRP GSGAGGFAVP AGSFSVFLFL SILLFTSLNE
401: RLLVPLAARL TGRPQGLTSL QRVGAGLALS VAAMAVSALV ERKRRDAANG PGHVAVSAFW LVPQYFLVGA GEAFAYVGQL EFFIREAPER MKSMSTGLFL
501: VTLSMGFFLS SLLVFAVDAA TAGTWIRNNL DRGRLDLFYW MLALLGVANF AVFVVFARRH QYKATSLPAS VAPDGTGHKE MDDFVAVTEA VEGVDV

Best Arabidopsis Sequence Match ( AT3G21670.1 )
(BLAST)

001: MVHVSSSHGA KDGSEEAYDY RGNPPDKSKT GGWLGAGLIL GSELSERICV MGISMNLVTY LVGDLHISSA KSATIVTNFM GTLNLLGLLG GFLADAKLGR
101: YKMVAISASV TALGVLLLTV ATTISSMRPP ICDDFRRLHH QCIEANGHQL ALLYVALYTI ALGGGGIKSN VSGFGSDQFD TSDPKEEKQM IFFFNRFYFS
201: ISVGSLFAVI ALVYVQDNVG RGWGYGISAA TMVVAAIVLL CGTKRYRFKK PKGSPFTTIW RVGFLAWKKR KESYPAHPSL LNGYDNTTVP HTEMLKCLDK
301: AAISKNESSP SSKDFEEKDP WIVSTVTQVE EVKLVMKLVP IWATNILFWT IYSQMTTFTV EQATFMDRKL GSFTVPAGSY SAFLILTILL FTSLNERVFV
401: PLTRRLTKKP QGITSLQRIG VGLVFSMAAM AVAAVIENAR REAAVNNDKK ISAFWLVPQY FLVGAGEAFA YVGQLEFFIR EAPERMKSMS TGLFLSTISM
501: GFFVSSLLVS LVDRVTDKSW LRSNLNKARL NYFYWLLVVL GALNFLIFIV FAMKHQYKAD VITVVVTDDD SVEKEVTKKE SSEFELKDIP

Arabidopsis Description

NPF6.4Protein NRT1/ PTR FAMILY 6.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVE0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.