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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:secretory
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY44319 Canola plasma membrane 96.24 97.88
Bra031295.1-P Field mustard plasma membrane 96.03 78.77
AT3G21670.1 Thale cress plasma membrane 89.56 72.71
HORVU2Hr1G065480.1 Barley golgi, plasma membrane 29.65 63.11
KRH73378 Soybean cytosol, peroxisome, plasma membrane 67.01 54.59
KRH14759 Soybean plasma membrane 66.6 54.34
PGSC0003DMT400001784 Potato cytosol, peroxisome, plasma membrane 64.3 51.94
Solyc12g006050.1.1 Tomato cytosol, peroxisome, plasma membrane 64.09 51.86
Solyc07g049290.2.1 Tomato nucleus 63.88 51.78
VIT_12s0059g01240.t01 Wine grape plastid 69.31 51.16
PGSC0003DMT400010957 Potato cytosol, peroxisome, plasma membrane 63.05 51.01
TraesCS5A01G409600.1 Wheat plasma membrane 61.59 49.66
TraesCS5D01G419200.2 Wheat plasma membrane 61.38 49.41
TraesCS5B01G414000.3 Wheat plasma membrane 60.75 48.99
GSMUA_Achr3P05990_001 Banana cytosol, plasma membrane, plastid 58.66 48.95
Zm00001d016982_P001 Maize plasma membrane 60.75 48.83
EES05323 Sorghum plasma membrane 60.75 48.74
HORVU5Hr1G099170.6 Barley plasma membrane 61.38 48.2
Os02t0580900-01 Rice plasma membrane 60.96 47.95
CDY30051 Canola cytosol, peroxisome, plasma membrane 34.03 46.7
TraesCS2D01G327000.1 Wheat plasma membrane 54.91 46.55
TraesCS2B01G346100.1 Wheat plasma membrane 54.28 46.02
TraesCS2A01G335800.1 Wheat mitochondrion 54.91 43.47
CDY69100 Canola plasma membrane 30.06 43.37
CDY40277 Canola plasma membrane 21.09 39.61
CDY45207 Canola golgi, plasma membrane 44.89 36.63
CDX71495 Canola plasma membrane 45.09 36.0
CDY30787 Canola mitochondrion 44.89 35.77
CDY31242 Canola plasma membrane 42.8 35.65
CDY21035 Canola plasma membrane 42.38 35.3
CDY26539 Canola plasma membrane 41.96 35.02
CDY15967 Canola plasma membrane 41.75 34.84
Os04t0464400-00 Rice peroxisome, plasma membrane 43.01 33.07
CDY70795 Canola plasma membrane 20.88 31.65
VIT_02s0087g00580.t01 Wine grape plasma membrane 18.16 29.39
CDY28437 Canola plasma membrane 34.66 28.42
CDY40278 Canola plasma membrane 34.66 28.42
CDY67653 Canola peroxisome 21.29 28.1
CDY11649 Canola cytosol, peroxisome, plasma membrane 34.86 28.07
CDX93764 Canola plasma membrane 34.66 27.67
CDY50182 Canola plasma membrane 33.61 27.38
CDX84348 Canola plasma membrane 32.15 27.3
CDY00323 Canola plasma membrane 32.15 27.3
CDY45893 Canola golgi, peroxisome, plasma membrane 25.89 26.0
CDY38765 Canola plasma membrane 35.07 25.85
CDX91126 Canola plastid 33.4 25.72
CDX85654 Canola cytosol, plasma membrane, plastid 33.19 25.56
CDY04575 Canola plasma membrane 27.56 25.48
CDY15763 Canola plasma membrane 25.68 25.15
CDY52284 Canola plasma membrane 26.3 24.47
CDY52286 Canola plasma membrane 26.3 24.42
CDY15100 Canola plasma membrane 26.72 21.92
CDY65523 Canola plastid 14.4 21.3
CDY45147 Canola mitochondrion 14.4 20.78
HORVU2Hr1G081050.1 Barley endoplasmic reticulum, extracellular 0.84 5.8
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078HMP9UniProt:A0A078HMP9EnsemblPlants:CDY38629ProteinID:CDY38629
ProteinID:CDY38629.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00066326001InterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF154SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EF24A8SEG:seg::::
Description
BnaA05g19580DBnaA05g19580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMP9]
Coordinates
chrLK032428:-:135315..137923
Molecular Weight (calculated)
52693.4 Da
IEP (calculated)
8.609
GRAVY (calculated)
0.235
Length
479 amino acids
Sequence
(BLAST)
001: MSIESNLLSS PFFFCFVHVS SHGAKDGSEE AFDYRGNPPD KSKTGGWLGA GLILGSELSE RICVMGISMN LVTYLVGDLH ISSAKSATIV TNFMGTLNLL
101: GLLGGFLADA KLGRYKMVAI SASVTALGVL LLTVATTIPS MRPPLCDDFR RLHHQCVEAN GHQLALLYVA LYTIALGGGG IKSNVSGFGS DQFDTSDPKE
201: EKQMIFFFNR FYFSISLGSL FAVIVLVYVQ DNVGRGWGYG ISAATMVVAA VVLLCGTKLY RFKKPKGSPF TVIWRVCFLA WKKRNESYPS HQSLLNGYET
301: TTVPHTERLK CLDKAAVVFK EKDPWMVSTV TQVEEVKLVV KLIPIWATNI LFWTIYSQMT TFTVEQATFM ERKLGSFTVP AGSYSAFLIL TILLFTSLNE
401: RVFVPLARMV TKKPQGITSL QRIGVGLVLS MAAMAVAAVI ENARREAEHQ YKADMISVGV DDSVEKEKEK SELELKDIP
Best Arabidopsis Sequence Match ( AT3G21670.1 )
(BLAST)
001: MVHVSSSHGA KDGSEEAYDY RGNPPDKSKT GGWLGAGLIL GSELSERICV MGISMNLVTY LVGDLHISSA KSATIVTNFM GTLNLLGLLG GFLADAKLGR
101: YKMVAISASV TALGVLLLTV ATTISSMRPP ICDDFRRLHH QCIEANGHQL ALLYVALYTI ALGGGGIKSN VSGFGSDQFD TSDPKEEKQM IFFFNRFYFS
201: ISVGSLFAVI ALVYVQDNVG RGWGYGISAA TMVVAAIVLL CGTKRYRFKK PKGSPFTTIW RVGFLAWKKR KESYPAHPSL LNGYDNTTVP HTEMLKCLDK
301: AAISKNESSP SSKDFEEKDP WIVSTVTQVE EVKLVMKLVP IWATNILFWT IYSQMTTFTV EQATFMDRKL GSFTVPAGSY SAFLILTILL FTSLNERVFV
401: PLTRRLTKKP QGITSLQRIG VGLVFSMAAM AVAAVIENAR REAAVNNDKK ISAFWLVPQY FLVGAGEAFA YVGQLEFFIR EAPERMKSMS TGLFLSTISM
501: GFFVSSLLVS LVDRVTDKSW LRSNLNKARL NYFYWLLVVL GALNFLIFIV FAMKHQYKAD VITVVVTDDD SVEKEVTKKE SSEFELKDIP
Arabidopsis Description
NPF6.4Protein NRT1/ PTR FAMILY 6.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVE0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.