Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g006050.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 96.79 | 96.79 |
| PGSC0003DMT400001784 | Potato | cytosol, peroxisome, plasma membrane | 80.91 | 80.78 |
| KRH14759 | Soybean | plasma membrane | 69.93 | 70.53 |
| KRH73378 | Soybean | cytosol, peroxisome, plasma membrane | 69.26 | 69.73 |
| Bra023868.1-P | Field mustard | plasma membrane | 65.03 | 66.61 |
| VIT_12s0059g01240.t01 | Wine grape | plastid | 72.97 | 66.56 |
| GSMUA_Achr3P05990_001 | Banana | cytosol, plasma membrane, plastid | 64.53 | 66.55 |
| Bra031295.1-P | Field mustard | plasma membrane | 64.36 | 65.24 |
| VIT_02s0087g00580.t01 | Wine grape | plasma membrane | 32.6 | 65.2 |
| AT3G21670.1 | Thale cress | plasma membrane | 64.53 | 64.75 |
| CDY44319 | Canola | plasma membrane | 51.18 | 64.33 |
| CDY38629 | Canola | plasma membrane | 51.01 | 63.05 |
| TraesCS5B01G414000.3 | Wheat | plasma membrane | 63.01 | 62.79 |
| TraesCS5D01G419200.2 | Wheat | plasma membrane | 63.01 | 62.69 |
| EES05323 | Sorghum | plasma membrane | 63.18 | 62.65 |
| TraesCS5A01G409600.1 | Wheat | plasma membrane | 62.67 | 62.46 |
| Os02t0580900-01 | Rice | plasma membrane | 64.19 | 62.4 |
| TraesCS2D01G327000.1 | Wheat | plasma membrane | 59.46 | 62.3 |
| Zm00001d016982_P001 | Maize | plasma membrane | 62.67 | 62.25 |
| TraesCS2B01G346100.1 | Wheat | plasma membrane | 58.95 | 61.77 |
| HORVU2Hr1G065480.1 | Barley | golgi, plasma membrane | 22.97 | 60.44 |
| HORVU5Hr1G099170.6 | Barley | plasma membrane | 62.16 | 60.33 |
| TraesCS2A01G335800.1 | Wheat | mitochondrion | 58.95 | 57.69 |
| HORVU2Hr1G081050.1 | Barley | endoplasmic reticulum, extracellular | 6.25 | 53.62 |
| PGSC0003DMT400012226 | Potato | cytosol, peroxisome, plasma membrane | 50.84 | 51.02 |
| PGSC0003DMT400070732 | Potato | plasma membrane | 49.16 | 50.61 |
| PGSC0003DMT400032493 | Potato | cytosol, peroxisome, plasma membrane | 49.83 | 50.0 |
| PGSC0003DMT400075163 | Potato | plasma membrane | 48.82 | 49.83 |
| PGSC0003DMT400035882 | Potato | plasma membrane | 46.62 | 46.62 |
| PGSC0003DMT400053569 | Potato | endoplasmic reticulum, plasma membrane | 20.78 | 46.24 |
| Os04t0464400-00 | Rice | peroxisome, plasma membrane | 39.7 | 37.72 |
| PGSC0003DMT400053373 | Potato | cytosol, peroxisome, plasma membrane | 36.66 | 35.87 |
| PGSC0003DMT400030530 | Potato | mitochondrion | 20.95 | 35.33 |
| PGSC0003DMT400045415 | Potato | plasma membrane | 34.29 | 35.3 |
| PGSC0003DMT400030533 | Potato | plasma membrane | 34.63 | 35.22 |
| PGSC0003DMT400082762 | Potato | plasma membrane | 26.69 | 34.96 |
| PGSC0003DMT400007441 | Potato | plasma membrane | 34.46 | 34.93 |
| PGSC0003DMT400030534 | Potato | plasma membrane | 33.78 | 34.19 |
| PGSC0003DMT400072037 | Potato | cytosol, peroxisome, plasma membrane | 37.33 | 33.84 |
| PGSC0003DMT400065182 | Potato | plasma membrane | 33.11 | 33.28 |
| PGSC0003DMT400045412 | Potato | mitochondrion | 34.97 | 33.01 |
| PGSC0003DMT400011063 | Potato | cytosol | 31.93 | 32.42 |
| PGSC0003DMT400046950 | Potato | plasma membrane | 33.28 | 32.24 |
| PGSC0003DMT400054593 | Potato | plasma membrane | 30.74 | 29.64 |
| PGSC0003DMT400071504 | Potato | plasma membrane | 29.22 | 28.98 |
Protein Annotations
| Gene3D:1.20.1250.20 | EntrezGene:102580089 | MapMan:24.2.2.9 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | InterPro:IPR020846 | UniProt:M0ZYU5 | InterPro:MFS_dom | InterPro:MFS_trans_sf | PFAM:PF00854 |
| EnsemblPlantsGene:PGSC0003DMG400004291 | PGSC:PGSC0003DMG400004291 | EnsemblPlants:PGSC0003DMT400010957 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF154 |
| SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0002962B08 | RefSeq:XP_006352020.1 | SEG:seg | : |
Description
Oligopeptide transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400004291]
Coordinates
chr12:-:6329642..6332333
Molecular Weight (calculated)
65237.3 Da
IEP (calculated)
8.789
GRAVY (calculated)
0.232
Length
592 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLVHNNAEK DGSTDGGLVD FRGNPVDKSR TGGWLGAGLI LGTELSERIC VMGISMNLVT YLVGDLHLPS SDSANIVTNF MGTLNLLALL GGFLADAKLG
101: RYATIATFGC IAAVGVTLLT LATSIPSMKP PVCDSRLKGH CIEASGQQLA LLYAALYTIS LGCGGIKSSV SGFGSDQFDS SNPKENKAMI YFFNRFYFCI
201: SLGSLFAVTV LVYIQDYVGR GWGYGISAGT MVLAVAVLLG GTSLYRFKKP EGSPLTIIWR VLILAWRKRK FSHPSDPGFL NEYHNAKVPH TKMLRCLDKA
301: AILDDYAVAN ENRINSWIVS TVSQVEEVKM VLKLIPIWST CILFWTVYSQ MNTFSIEQAT FMNRNVGKFG IPAGSFSVFL FISILLFTSI NERVTVPIAR
401: KITGNRQGLT SLQRVGIGLI LSIVGMVSAA VVEKQRRENA INHNYSISAF WLVPQFFIVG AGEAFAYVGQ LEFFIREAPE GMKSMSTGLF LSTLSMGFFI
501: SSLLVSIVHK VTNGSWLKNN LNNGKLDYFY WMLAVLGVLN YFVFLVFSTR HQYKTQHLST TLEDSEEELK NWNDTSIDNT QKNPNDAQKE QV
101: RYATIATFGC IAAVGVTLLT LATSIPSMKP PVCDSRLKGH CIEASGQQLA LLYAALYTIS LGCGGIKSSV SGFGSDQFDS SNPKENKAMI YFFNRFYFCI
201: SLGSLFAVTV LVYIQDYVGR GWGYGISAGT MVLAVAVLLG GTSLYRFKKP EGSPLTIIWR VLILAWRKRK FSHPSDPGFL NEYHNAKVPH TKMLRCLDKA
301: AILDDYAVAN ENRINSWIVS TVSQVEEVKM VLKLIPIWST CILFWTVYSQ MNTFSIEQAT FMNRNVGKFG IPAGSFSVFL FISILLFTSI NERVTVPIAR
401: KITGNRQGLT SLQRVGIGLI LSIVGMVSAA VVEKQRRENA INHNYSISAF WLVPQFFIVG AGEAFAYVGQ LEFFIREAPE GMKSMSTGLF LSTLSMGFFI
501: SSLLVSIVHK VTNGSWLKNN LNNGKLDYFY WMLAVLGVLN YFVFLVFSTR HQYKTQHLST TLEDSEEELK NWNDTSIDNT QKNPNDAQKE QV
001: MVHVSSSHGA KDGSEEAYDY RGNPPDKSKT GGWLGAGLIL GSELSERICV MGISMNLVTY LVGDLHISSA KSATIVTNFM GTLNLLGLLG GFLADAKLGR
101: YKMVAISASV TALGVLLLTV ATTISSMRPP ICDDFRRLHH QCIEANGHQL ALLYVALYTI ALGGGGIKSN VSGFGSDQFD TSDPKEEKQM IFFFNRFYFS
201: ISVGSLFAVI ALVYVQDNVG RGWGYGISAA TMVVAAIVLL CGTKRYRFKK PKGSPFTTIW RVGFLAWKKR KESYPAHPSL LNGYDNTTVP HTEMLKCLDK
301: AAISKNESSP SSKDFEEKDP WIVSTVTQVE EVKLVMKLVP IWATNILFWT IYSQMTTFTV EQATFMDRKL GSFTVPAGSY SAFLILTILL FTSLNERVFV
401: PLTRRLTKKP QGITSLQRIG VGLVFSMAAM AVAAVIENAR REAAVNNDKK ISAFWLVPQY FLVGAGEAFA YVGQLEFFIR EAPERMKSMS TGLFLSTISM
501: GFFVSSLLVS LVDRVTDKSW LRSNLNKARL NYFYWLLVVL GALNFLIFIV FAMKHQYKAD VITVVVTDDD SVEKEVTKKE SSEFELKDIP
101: YKMVAISASV TALGVLLLTV ATTISSMRPP ICDDFRRLHH QCIEANGHQL ALLYVALYTI ALGGGGIKSN VSGFGSDQFD TSDPKEEKQM IFFFNRFYFS
201: ISVGSLFAVI ALVYVQDNVG RGWGYGISAA TMVVAAIVLL CGTKRYRFKK PKGSPFTTIW RVGFLAWKKR KESYPAHPSL LNGYDNTTVP HTEMLKCLDK
301: AAISKNESSP SSKDFEEKDP WIVSTVTQVE EVKLVMKLVP IWATNILFWT IYSQMTTFTV EQATFMDRKL GSFTVPAGSY SAFLILTILL FTSLNERVFV
401: PLTRRLTKKP QGITSLQRIG VGLVFSMAAM AVAAVIENAR REAAVNNDKK ISAFWLVPQY FLVGAGEAFA YVGQLEFFIR EAPERMKSMS TGLFLSTISM
501: GFFVSSLLVS LVDRVTDKSW LRSNLNKARL NYFYWLLVVL GALNFLIFIV FAMKHQYKAD VITVVVTDDD SVEKEVTKKE SSEFELKDIP
Arabidopsis Description
NPF6.4Protein NRT1/ PTR FAMILY 6.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVE0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.