Factsheet for PGSC0003DMT400053569

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 4
endoplasmic reticulum 3
plasma membrane 4
vacuole 3
extracellular 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane, vacuole
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400070732	Potato	plasma membrane	64.29	29.74
PGSC0003DMT400075163	Potato	plasma membrane	63.53	29.14
TraesCS1A01G031300.1	Wheat	peroxisome	62.41	28.52
TraesCS1B01G038700.1	Wheat	peroxisome	61.28	28.01
HORVU1Hr1G004720.4	Barley	plasma membrane	60.53	27.9
TraesCS1D01G032700.1	Wheat	peroxisome	60.9	27.84
KXG32694	Sorghum	cytosol	61.28	27.77
Zm00001d044529_P001	Maize	cytosol, peroxisome, plasma membrane	61.65	27.75
Zm00001d009399_P001	Maize	cytosol, peroxisome, plasma membrane	61.65	27.75
VIT_11s0016g05180.t01	Wine grape	plasma membrane	60.15	27.35
PGSC0003DMT400012226	Potato	cytosol, peroxisome, plasma membrane	52.63	23.73
PGSC0003DMT400032493	Potato	cytosol, peroxisome, plasma membrane	52.26	23.56
PGSC0003DMT400035882	Potato	plasma membrane	51.5	23.14
PGSC0003DMT400010957	Potato	cytosol, peroxisome, plasma membrane	46.24	20.78
PGSC0003DMT400001784	Potato	cytosol, peroxisome, plasma membrane	45.86	20.57
PGSC0003DMT400030533	Potato	plasma membrane	37.59	17.18
PGSC0003DMT400007441	Potato	plasma membrane	36.47	16.61
PGSC0003DMT400030534	Potato	plasma membrane	34.96	15.9
PGSC0003DMT400045415	Potato	plasma membrane	34.21	15.83
PGSC0003DMT400053373	Potato	cytosol, peroxisome, plasma membrane	34.59	15.21
PGSC0003DMT400071504	Potato	plasma membrane	33.46	14.91
PGSC0003DMT400065182	Potato	plasma membrane	32.71	14.77
PGSC0003DMT400045412	Potato	mitochondrion	34.59	14.67
PGSC0003DMT400072037	Potato	cytosol, peroxisome, plasma membrane	34.96	14.24
PGSC0003DMT400054593	Potato	plasma membrane	31.95	13.84
PGSC0003DMT400011063	Potato	cytosol	30.08	13.72
PGSC0003DMT400046950	Potato	plasma membrane	29.32	12.77
PGSC0003DMT400082762	Potato	plasma membrane	21.05	12.39
PGSC0003DMT400030530	Potato	mitochondrion	8.27	6.27

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006857	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
UniProt:M1BV51	InterPro:MFS_trans_sf	PFAM:PF00854	EnsemblPlantsGene:PGSC0003DMG400020782	PGSC:PGSC0003DMG400020782	EnsemblPlants:PGSC0003DMT400053569
InterPro:POT_fam	ScanProsite:PS01022	PANTHER:PTHR11654	PANTHER:PTHR11654:SF85	InterPro:PTR2_symporter_CS	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI0002968507	SEG:seg	:	:	:

Description

Oligopeptide transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400020782]

Coordinates

chr8:-:31997728..32002607

Molecular Weight (calculated)

29718.5 Da

IEP (calculated)

9.325

GRAVY (calculated)

0.335

Length

266 amino acids

Sequence
(BLAST)

001: MGIAVNLVTY LIGTMHLPSA TSAKIVSDFM GTSFLLCLLG GVIADSFLGR YRTIAIFAII QTLGTGMLSI STRLPQLQPT PCNVHYSLKS TNCEQATTSQ
101: MSVLYISLYL MALGIGGLKS SVSGFCTDQF DETDEKEKAQ LTLFFNWFFF FITIGTLLAV TVLVYIQDEV GRSWGYGICS FSMLVAVIMF LSGTKRYRYK
201: KTMKSPIAQI IQVLIAAIRK RRLQLPKNDC FLYENNSDSS RISHTDQFRS GLHVYRTIGF IHHTIT

Best Arabidopsis Sequence Match ( AT1G12110.1 )
(BLAST)

001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH

Arabidopsis Description

NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.