CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044529_P001	Maize	cytosol, peroxisome, plasma membrane	94.72	94.08
TraesCS1B01G038700.1	Wheat	peroxisome	84.33	85.05
TraesCS1D01G032700.1	Wheat	peroxisome	83.99	84.71
TraesCS1A01G031300.1	Wheat	peroxisome	83.82	84.54
HORVU1Hr1G004720.4	Barley	plasma membrane	81.77	83.19
Solyc01g096880.2.1	Tomato	plasma membrane	63.71	65.16
GSMUA_Achr6P05170_001	Banana	plasma membrane	64.05	64.94
PGSC0003DMT400070732	Potato	plasma membrane	63.54	64.87
Solyc07g032490.2.1	Tomato	plasma membrane	62.86	64.85
VIT_11s0016g05170.t01	Wine grape	plasma membrane	63.2	64.41
PGSC0003DMT400075163	Potato	plasma membrane	63.2	63.97
KRH03705	Soybean	plasma membrane	63.71	63.93
AT2G26690.1	Thale cress	plasma membrane	62.69	63.78
KRH20280	Soybean	plasma membrane	62.69	63.34
CDY45207	Canola	golgi, plasma membrane	62.35	62.35
Solyc08g061020.1.1	Tomato	plasma membrane	31.69	62.0
Bra012052.1-P	Field mustard	plasma membrane	54.86	61.8
CDX71495	Canola	plasma membrane	63.03	61.67
PGSC0003DMT400053569	Potato	endoplasmic reticulum, plasma membrane	27.77	61.28
CDY30787	Canola	mitochondrion	62.52	61.06
GSMUA_Achr7P08300_001	Banana	plasma membrane	65.08	56.76
GSMUA_Achr4P30700_001	Banana	plasma membrane	65.93	56.33
Solyc08g061010.2.1	Tomato	plasma membrane	24.87	54.89
EES13374	Sorghum	plasma membrane	54.51	53.24
VIT_11s0016g05180.t01	Wine grape	plasma membrane	51.62	51.79
EER91957	Sorghum	plasma membrane	51.62	50.92
OQU93471	Sorghum	plasma membrane	50.77	49.26
EES05323	Sorghum	plasma membrane	49.4	48.58
EES12219	Sorghum	plasma membrane	35.6	35.48
EER89980	Sorghum	plasma membrane	36.29	35.38
OQU83190	Sorghum	plasma membrane	34.07	35.34
EES15876	Sorghum	plasma membrane	32.88	34.34
EES15877	Sorghum	plasma membrane	32.71	33.57
EES15875	Sorghum	plasma membrane	31.86	32.86
OQU87541	Sorghum	cytosol, peroxisome, plasma membrane	34.07	32.63
OQU83318	Sorghum	mitochondrion, plasma membrane	28.11	32.16
KXG24751	Sorghum	peroxisome, plasma membrane, vacuole	32.88	32.06
KXG28299	Sorghum	plasma membrane	31.35	31.89
OQU81850	Sorghum	plasma membrane	29.64	31.64
OQU81851	Sorghum	plasma membrane	30.32	31.62
EES00465	Sorghum	plastid	35.6	31.33
KXG26617	Sorghum	plasma membrane	30.15	30.05
EES19057	Sorghum	plastid	12.1	28.4
EES14657	Sorghum	plasma membrane	27.43	28.25
EES11151	Sorghum	plasma membrane	27.94	28.18
EES12425	Sorghum	plasma membrane	23.17	25.0

Protein Annotations

MapMan:24.2.2.9	UniProt:A0A1B6Q453	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006857	GO:GO:0006950	GO:GO:0008150	GO:GO:0009611	GO:GO:0009719	GO:GO:0009753
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	EnsemblPlants:KXG32694
ProteinID:KXG32694	ProteinID:KXG32694.1	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam
ScanProsite:PS01022	PANTHER:PTHR11654	PANTHER:PTHR11654:SF85	InterPro:PTR2_symporter_CS	EnsemblPlantsGene:SORBI_3003G185100	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI0001C80AEE	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:49714928..49716956

Molecular Weight (calculated)

63254.4 Da

IEP (calculated)

8.517

GRAVY (calculated)

0.418

Length

587 amino acids

Sequence
(BLAST)

001: MVQERAAWGA SDGGGNLVQD AVDYRGCPAD KSSTGGWVAA ALALGIELCE RLSTMGIAVN LVTYLTGTMH LPSAAAANVV TDFMGTSFLL CFLGGFLADS
101: FLGRYLTIAI FALVQAIGTG LLAVSTEVRQ LRPPPCGSGA AGSCEQATGL QMGVLYVCLY LIALGTGGLK SSVSGFGTDQ FDERDARERA AMGLFFNRFL
201: FFISVGTLLA VTVFVYVQDH VGRSWAYGIC AGAMLVAIAV FLSGTRRYRY KRSSGSPIVH ILQVLVAAAR KRNVVKQPLT ASALYEDRPE HARIPHTAQF
301: PCLDRAAVMA GDDDNEVGRD GRPTPNPWKL CNVSRVEEVK MVARLMPVWA TTILFWTIYA QMITFSVEQA TTMDRRMGGF EIPAASLTVF FVGAIMLTLA
401: FYDRVFVPLC RSFMTGRQGF TNLEKIGIGL VLSIVGMAAA AICEKKRLAV AATSRGAGHG SLPISVFMLT PQFLLVGAGE AFIYTGQLDF FITRSPKSMK
501: TMSTGLFLTT LSLGFFLSSA LVSLVKSCTR WLGDTINHSR LDYFYWLLAV LGVVNLVAYL VCAMWATAPA SRQAEQPQSA MAADEKC

Best Arabidopsis Sequence Match ( AT2G26690.1 )
(BLAST)

001: MESKGSWTVA DAVDYKGRPA DKSKTGGWIT AALILGIEVV ERLSTMGIAV NLVTYLMETM HLPSSTSANI VTDFMGTSFL LCLLGGFLAD SFLGRFKTIG
101: IFSTIQALGT GALAVATKLP ELRPPTCHHG EACIPATAFQ MTILYVSLYL IALGTGGLKS SISGFGSDQF DDKDPKEKAH MAFFFNRFFF FISMGTLLAV
201: TVLVYMQDEV GRSWAYGICT VSMAIAIVIF LCGTKRYRYK KSQGSPVVQI FQVIAAAFRK RKMELPQSIV YLYEDNPEGI RIEHTDQFHL LDKAAIVAEG
301: DFEQTLDGVA IPNPWKLSSV TKVEEVKMMV RLLPIWATTI IFWTTYAQMI TFSVEQASTM RRNIGSFKIP AGSLTVFFVA AILITLAVYD RAIMPFWKKW
401: KGKPGFSSLQ RIAIGLVLST AGMAAAALVE QKRLSVAKSS SQKTLPISVF LLVPQFFLVG AGEAFIYTGQ LDFFITQSPK GMKTMSTGLF LTTLSLGFFV
501: SSFLVSIVKR VTSTSTDVGW LADNINHGRL DYFYWLLVIL SGINFVVYII CALWFKPTKG KDSVEKENGK GFSVEDC

Arabidopsis Description

NPF6.2Protein NRT1/ PTR FAMILY 6.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZY4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.