CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043463_P001	Maize	plasma membrane	77.98	87.39
HORVU3Hr1G071510.1	Barley	golgi, plasma membrane	68.84	73.91
TraesCS3A01G272600.1	Wheat	plasma membrane	63.13	72.61
HORVU2Hr1G098210.2	Barley	mitochondrion, plasma membrane	33.12	66.12
KRH11088	Soybean	plasma membrane	50.9	52.09
KRH42929	Soybean	plasma membrane	51.22	52.07
KRH21158	Soybean	plasma membrane	50.41	51.93
KRH59041	Soybean	plasma membrane	50.24	51.85
Solyc03g005950.1.1	Tomato	plasma membrane	51.71	50.56
PGSC0003DMT400071504	Potato	plasma membrane	44.21	45.39
EER89980	Sorghum	plasma membrane	38.34	39.04
EES12219	Sorghum	plasma membrane	37.36	38.88
OQU81850	Sorghum	plasma membrane	34.75	38.73
OQU81851	Sorghum	plasma membrane	35.4	38.54
OQU83190	Sorghum	plasma membrane	35.24	38.16
KXG26617	Sorghum	plasma membrane	35.89	37.35
KXG28299	Sorghum	plasma membrane	35.07	37.26
EES15876	Sorghum	plasma membrane	33.61	36.65
EES13374	Sorghum	plasma membrane	35.56	36.27
EES15875	Sorghum	plasma membrane	33.61	36.2
KXG24751	Sorghum	peroxisome, plasma membrane, vacuole	35.24	35.88
EES14657	Sorghum	plasma membrane	33.12	35.61
OQU83318	Sorghum	mitochondrion, plasma membrane	29.53	35.28
EER91957	Sorghum	plasma membrane	33.93	34.96
EES11151	Sorghum	plasma membrane	33.12	34.88
EES15877	Sorghum	plasma membrane	32.46	34.79
KXG32694	Sorghum	cytosol	32.63	34.07
OQU93471	Sorghum	plasma membrane	33.61	34.05
EES05323	Sorghum	plasma membrane	32.79	33.67
EES00465	Sorghum	plastid	32.14	29.54
EES12425	Sorghum	plasma membrane	25.77	29.04
EES19057	Sorghum	plastid	9.46	23.2

Protein Annotations

MapMan:24.2.2.9	UniProt:A0A1W0VZK7	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:MFS_trans_sf	EnsemblPlants:OQU87541	ProteinID:OQU87541	ProteinID:OQU87541.1	PFAM:PF00854	InterPro:POT_fam
PANTHER:PTHR11654	PANTHER:PTHR11654:SF131	EnsemblPlantsGene:SORBI_3003G295500	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0009DC8EF2
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:62779593..62784735

Molecular Weight (calculated)

67755.3 Da

IEP (calculated)

8.619

GRAVY (calculated)

0.297

Length

613 amino acids

Sequence
(BLAST)

001: MENEEMSKAS EANGKADSTS MVETRAVGGN TYEVIEGKVD WRGRPALRGR HGGLGNCFFI LANFGFENMA TLSLAVNLVL YFIGVMHMNA EDSSNLLTNY
101: MGASYMIAVL ISVFADVFVG RYMTVILSSL VELVGILLLF LQARSDRLKP PMCDPRQPLT CLRVHGGNEV HLYLALYLIA LGSGGIKAAL PAHCADQFDA
201: KHPKEKQQMS SCFNYLLLSL CTGGVVSVTL FLWIQGLPDR GWEKGFAAAT GVMGLAVIVF IAGMPRYRIA TVQGSSALKE ICQVYVAAIR NRKQQLPEDP
301: DELYEISRSK ASPDMEFLSH RDRPFRFLDR AAIVQTDKDA AANPWRQCRV TQVEQAKTVL AMVPIFCSAI IMGTCLAQLQ TFSMVQGSTM DTTLGPHFKM
401: PVASMLIIPL GLLIFAVPIY EQLFVPLARR LTGIPTGITY LQRVGVGLVL SIVSMVIAAV VEAQRKKVAT RNGMLDMIVG VQHLPMSCFW LAPQFAVFGI
501: ADMFTYVGLM EFFYSQAPAA LKSMSSSFLW CSLSLGYFMS TIIVKAVNAA TRRSTASGGW LAGSINRNHL DLFFWLLAVL STLNLFNYLF WARWYKYRPQ
601: EKAPAAEEQQ QQV

Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)

001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS

Arabidopsis Description

NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.