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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU81851 Sorghum plasma membrane 80.0 78.15
Os04t0491500-02 Rice plasma membrane 78.18 77.2
KXG26617 Sorghum plasma membrane 80.55 75.21
EES14657 Sorghum plasma membrane 63.45 61.23
EES11151 Sorghum plasma membrane 61.27 57.9
EES15875 Sorghum plasma membrane 55.27 53.43
EES15876 Sorghum plasma membrane 52.91 51.78
KXG28299 Sorghum plasma membrane 54.18 51.65
OQU83318 Sorghum mitochondrion, plasma membrane 47.64 51.07
HORVU2Hr1G085260.3 Barley plasma membrane 46.73 50.1
EES15877 Sorghum plasma membrane 50.91 48.95
EES12425 Sorghum plasma membrane 41.27 41.73
Os04t0491200-00 Rice plasma membrane, vacuole 46.91 39.39
EER89980 Sorghum plasma membrane 40.55 37.04
KRG96656 Soybean plasma membrane 38.36 36.63
KRH51937 Soybean plasma membrane 37.82 36.36
KRH68384 Soybean plasma membrane 38.18 36.08
Solyc10g039290.1.1 Tomato plasma membrane 37.45 36.01
EES12219 Sorghum plasma membrane 38.55 35.99
KRH19434 Soybean plasma membrane 38.18 35.59
Solyc04g079520.2.1 Tomato plasma membrane 37.64 35.57
KRH02511 Soybean plasma membrane 38.36 35.52
PGSC0003DMT400030533 Potato plasma membrane 37.45 35.4
PGSC0003DMT400011063 Potato cytosol 37.45 35.33
KRH33721 Soybean plasma membrane 38.73 35.26
Solyc04g079510.1.1 Tomato plasma membrane 36.36 35.03
OQU83190 Sorghum plasma membrane 36.0 34.98
KRG90426 Soybean plasma membrane 38.0 34.78
OQU87541 Sorghum cytosol, peroxisome, plasma membrane 38.73 34.75
PGSC0003DMT400030534 Potato plasma membrane 36.36 34.19
KXG24751 Sorghum peroxisome, plasma membrane, vacuole 37.27 34.05
PGSC0003DMT400054593 Potato plasma membrane 37.82 33.88
Solyc01g102360.1.1 Tomato plasma membrane 37.45 33.83
Solyc04g079530.2.1 Tomato plasma membrane 35.45 33.68
PGSC0003DMT400030530 Potato mitochondrion 21.45 33.62
PGSC0003DMT400046950 Potato plasma membrane 37.27 33.55
KRH61236 Soybean plasma membrane 37.27 33.5
VIT_14s0060g00220.t01 Wine grape plasma membrane 36.91 32.85
EES05323 Sorghum plasma membrane 34.0 31.32
VIT_18s0001g11280.t01 Wine grape plastid 36.0 31.13
EES13374 Sorghum plasma membrane 34.0 31.11
EER91957 Sorghum plasma membrane 33.64 31.09
OQU93471 Sorghum plasma membrane 33.45 30.41
KXG32694 Sorghum cytosol 31.64 29.64
GSMUA_Achr11P... Banana plasma membrane 33.09 27.53
EES00465 Sorghum plastid 33.27 27.44
EES19057 Sorghum plastid 10.0 22.0
Os04t0491350-00 Rice plasma membrane 0.91 1.08
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9UniProt:A0A1Z5RDM0GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:MFS_trans_sfEnsemblPlants:OQU81850ProteinID:OQU81850ProteinID:OQU81850.1PFAM:PF00854InterPro:POT_fam
PANTHER:PTHR11654PANTHER:PTHR11654:SF104EnsemblPlantsGene:SORBI_3006G130501SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000B8BAA44
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr6:-:49473392..49476692
Molecular Weight (calculated)
61088.0 Da
IEP (calculated)
9.032
GRAVY (calculated)
0.394
Length
550 amino acids
Sequence
(BLAST)
001: MTIRGFVDWR GNPINREVHG GVRAAWFIYF LTVVANIVNV PNMLNMVTYL HGTIHMGVSR SATTVTNVLG ATSGFALIGA FLSDSYITRS RTILIFGPLE
101: FLGYGLLALQ AHLPSLHPPP CNIEAEPSNC KEVHGWNSTL LFAALYISAL GDGCMRACMP SLGADQFDHE NPSESRQQSS FFNWYTFGIS FGGFIGLILV
201: VWLQNDKGWD IGFGLCAILI LLGLLVVAVG LPFYRNQIPE GSPLTRILQV LVVAFRNRSL ELPEKLEEAQ ESSTEPGCIE VLPETNSLKV LDKACINRGK
301: DGVWSLCSRT KVEETKIVLR VLPLFISSII GYISNPVLFT FTVQQGGMTN TRLGKIHVSP ATLFIIPTIF QMVMLPVYDQ FLVPFLRKRT GYASGITHLQ
401: RVGIGFTSII LASVIAAVVE RKRKEAAVQM SLFWLTPQFF LLGVSDVTSF PGLLEFFNSE APRGMKSIAA ALFWCVLGLS SLLATFLVQI VNRATRHGHQ
501: AGWLEATSLN SSRLDLFYWV VAVVGFLAFL NYMFWAKRYV YRHNPRIVVR
Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)
001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
Arabidopsis Description
NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.