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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • mitochondrion 2
  • peroxisome 1
  • vacuole 2
  • endoplasmic reticulum 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, peroxisome, secretory
BaCelLo:nucleus
EpiLoc:extracellular
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:vacuole
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES15876 Sorghum plasma membrane 72.9 74.2
EES15875 Sorghum plasma membrane 68.18 68.54
Os12t0231000-01 Rice plasma membrane 66.43 65.18
KXG28299 Sorghum plasma membrane 56.29 55.81
OQU83318 Sorghum mitochondrion, plasma membrane 47.2 52.63
OQU81850 Sorghum plasma membrane 48.95 50.91
OQU81851 Sorghum plasma membrane 48.78 49.56
KXG26617 Sorghum plasma membrane 48.78 47.37
EES14657 Sorghum plasma membrane 46.5 46.67
EES11151 Sorghum plasma membrane 46.5 45.7
EES12425 Sorghum plasma membrane 36.36 38.24
KRH51937 Soybean plasma membrane 37.06 37.06
EES12219 Sorghum plasma membrane 37.24 36.16
Solyc04g079520.2.1 Tomato plasma membrane 36.36 35.74
PGSC0003DMT400030533 Potato plasma membrane 36.19 35.57
Solyc04g079510.1.1 Tomato plasma membrane 35.14 35.2
KRH61236 Soybean plasma membrane 37.59 35.13
OQU83190 Sorghum plasma membrane 34.44 34.81
PGSC0003DMT400030530 Potato mitochondrion 21.33 34.76
PGSC0003DMT400030534 Potato plasma membrane 35.14 34.36
Solyc04g079530.2.1 Tomato plasma membrane 34.62 34.2
EER89980 Sorghum plasma membrane 35.66 33.89
KRG96656 Soybean plasma membrane 33.74 33.51
EER91957 Sorghum plasma membrane 34.79 33.45
KRH19434 Soybean plasma membrane 34.44 33.39
VIT_18s0001g11280.t01 Wine grape plastid 37.06 33.33
KRH68384 Soybean plasma membrane 33.92 33.33
KRH02511 Soybean plasma membrane 34.62 33.33
KXG24751 Sorghum peroxisome, plasma membrane, vacuole 34.97 33.22
EES13374 Sorghum plasma membrane 34.79 33.11
PGSC0003DMT400054593 Potato plasma membrane 35.31 32.9
Solyc10g039290.1.1 Tomato plasma membrane 32.87 32.87
EES05323 Sorghum plasma membrane 34.27 32.83
KXG32694 Sorghum cytosol 33.57 32.71
OQU87541 Sorghum cytosol, peroxisome, plasma membrane 34.79 32.46
KRH33721 Soybean plasma membrane 34.09 32.28
KRG90426 Soybean plasma membrane 33.74 32.11
PGSC0003DMT400011063 Potato cytosol 32.69 32.08
PGSC0003DMT400046950 Potato plasma membrane 33.74 31.59
VIT_14s0060g00220.t01 Wine grape plasma membrane 34.09 31.55
Solyc01g102360.1.1 Tomato plasma membrane 33.57 31.53
OQU93471 Sorghum plasma membrane 32.69 30.91
GSMUA_Achr11P... Banana plasma membrane 33.57 29.05
EES00465 Sorghum plastid 32.17 27.59
EES19057 Sorghum plastid 8.92 20.4
Protein Annotations
MapMan:24.2.2.9EntrezGene:8084235UniProt:C5YTX6EnsemblPlants:EES15877ProteinID:EES15877ProteinID:EES15877.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_fam
PANTHER:PTHR11654PANTHER:PTHR11654:SF21EnsemblPlantsGene:SORBI_3008G081500SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0001A8815E
RefSeq:XP_002442039.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr8:+:14583578..14588458
Molecular Weight (calculated)
62368.4 Da
IEP (calculated)
7.299
GRAVY (calculated)
0.455
Length
572 amino acids
Sequence
(BLAST)
001: MALQGLVDWR GHPVNQKKQG GVRASVFIHF LIVMSNMANI PMIMNLVTYL HGTMHMDVKD ASTTSTNFFG AICFFCFLGA FISDSYIKRF YTMLIFAPIE
101: ILGYMLLAYQ AHVPSLHPPP CDMINNPSDC TPVSGRNLSL LTLGLYLIPL GESSLRTCAA ALGGDQFDED TPSELPGKIS FFNWFEISIS LGAMVGVVFL
201: VWVQDNVGWD LGFALAALMV LAGTLGVAVG LPFYRHQKPA GSPITRILQV FVAAFRKRKL RVPENLMEMH NKVTDGTGTS VEFVDRATGG FMFLDKAAVN
301: DGDTRAWSLC TVAQVEEAKT ILRMIPIFLA SILAYIPFSL LLSLTVEQAG TMDTRLGGIA VPPASLTVIP VTVQVLILLV YDRAVVPWLR RATGYAGGVT
401: HLQRAGVGFA SSVLAIATAA VVEDQRRRRR RSGGPPVSAF WLAPQFVLLC VLDVTSFVGL LEFFYSEVST GMKSIGGSVV FCILGVASWL GSLLIQVVND
501: VTARRAGHGW LGGANLDASR LDLFYWLLAV LGLVSFGLYV LCAWSYTYRH DPRMQATTTM DSSEVADDQH TC
Best Arabidopsis Sequence Match ( AT1G27040.2 )
(BLAST)
001: MHGDVSKWEG YADWRNKAAL RGRHGGMLAA SFVLAVEILE NLAFLANASN LVLYLKNFMH MSLARSSSEV TTFMATAFLL ALLGGFLADA FFSTFVIFLI
101: SASIEFLGLI LLTIQARRPS LMPPPCKSSA ALRCEVVGGS KAAFLFVGLY LVSLGIGGIK GSLPSHGAEQ FDEGTPKGRK QRSTFFNYYV FCLSCGALVA
201: VTFVVWIEDN KGWEWGFGVS TISIFLSILV FLLGSRFYKN KIPRGSPLTT IFKVLLAASI VSCSSKTSSN HFTSREVQSE HEEKTPSQSL TNSLTCLNKA
301: IEGKTHHIWL ECTVQQVEDV KIVLKMLPIF GCTIMLNCCL AQLSTYSVHQ AATMNRKIVN FNVPSASLPV FPVVFMLILA PTYDHLIIPF ARKVTKSEIG
401: ITHLQRIGVG LVLSIVAMAV AALVELKRKQ VAREAGLLDS EETLPITFLW IALQYLFLGS ADLFTLAGLL EFFFTEAPSS MRSLATSLSW ASLALGYYLS
501: SVMVPIVNRV TKSAGQSPWL GEKLNRNRLD LFYWLMCVLS VVNFLHYLFW AKRYKYISTG SIS
Arabidopsis Description
NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.