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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • golgi 2
  • vacuole 2
  • endoplasmic reticulum 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
EpiLoc:extracellular
MultiLoc:golgi
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES15877 Sorghum plasma membrane 74.2 72.9
EES15875 Sorghum plasma membrane 73.31 72.41
Os12t0231000-01 Rice plasma membrane 73.49 70.84
KXG28299 Sorghum plasma membrane 58.9 57.37
OQU81850 Sorghum plasma membrane 51.78 52.91
OQU83318 Sorghum mitochondrion, plasma membrane 48.04 52.63
OQU81851 Sorghum plasma membrane 51.6 51.51
KXG26617 Sorghum plasma membrane 52.14 49.75
EES14657 Sorghum plasma membrane 47.86 47.19
EES11151 Sorghum plasma membrane 48.22 46.56
EES12425 Sorghum plasma membrane 38.43 39.71
KRH51937 Soybean plasma membrane 39.15 38.46
PGSC0003DMT400030530 Potato mitochondrion 23.67 37.89
Solyc04g079510.1.1 Tomato plasma membrane 38.08 37.48
EES12219 Sorghum plasma membrane 38.61 36.84
KRH61236 Soybean plasma membrane 39.68 36.44
PGSC0003DMT400030534 Potato plasma membrane 37.9 36.41
PGSC0003DMT400030533 Potato plasma membrane 37.37 36.08
Solyc04g079530.2.1 Tomato plasma membrane 37.01 35.92
Solyc04g079520.2.1 Tomato plasma membrane 37.19 35.91
KRG96656 Soybean plasma membrane 35.94 35.07
KRH68384 Soybean plasma membrane 36.3 35.05
KRH02511 Soybean plasma membrane 36.83 34.85
KXG24751 Sorghum peroxisome, plasma membrane, vacuole 37.19 34.72
OQU83190 Sorghum plasma membrane 34.7 34.45
KRH19434 Soybean plasma membrane 35.94 34.24
EER89980 Sorghum plasma membrane 36.65 34.22
PGSC0003DMT400054593 Potato plasma membrane 37.01 33.88
EES13374 Sorghum plasma membrane 35.94 33.61
OQU87541 Sorghum cytosol, peroxisome, plasma membrane 36.65 33.61
KRG90426 Soybean plasma membrane 35.77 33.44
Solyc10g039290.1.1 Tomato plasma membrane 33.99 33.39
VIT_18s0001g11280.t01 Wine grape plastid 37.72 33.33
KRH33721 Soybean plasma membrane 35.77 33.28
EER91957 Sorghum plasma membrane 35.05 33.11
KXG32694 Sorghum cytosol 34.34 32.88
PGSC0003DMT400011063 Potato cytosol 33.81 32.59
VIT_14s0060g00220.t01 Wine grape plasma membrane 35.77 32.52
Solyc01g102360.1.1 Tomato plasma membrane 35.23 32.51
EES05323 Sorghum plasma membrane 34.52 32.5
PGSC0003DMT400046950 Potato plasma membrane 35.05 32.24
OQU93471 Sorghum plasma membrane 32.92 30.58
GSMUA_Achr11P... Banana plasma membrane 34.7 29.5
EES00465 Sorghum plastid 32.74 27.59
EES19057 Sorghum plastid 8.72 19.6
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9EntrezGene:8058179UniProt:C5YTX5EnsemblPlants:EES15876ProteinID:EES15876
ProteinID:EES15876.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:MFS_trans_sfPFAM:PF00854
InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF21EnsemblPlantsGene:SORBI_3008G081400SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0001A8815DRefSeq:XP_002442038.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr8:+:14480361..14484229
Molecular Weight (calculated)
61619.9 Da
IEP (calculated)
7.837
GRAVY (calculated)
0.522
Length
562 amino acids
Sequence
(BLAST)
001: MALQGLVDWK GQPVTGKRHG GVKASVFIHV LIVMANISNI PLILNLVSYL HGTMHMGVKD ASTTSTNFFG AICFFSFLGA FISDSYIKRF YTILIFAPIE
101: IMGYVLLACQ AHFPSLHPPP CDMINHPNDC SVVSGRNLSL LTLGLYLIPV GEGSMRACAA ALGGDQFDGE DPAELHAKIS YFNWFAFSIS LGGFVGLVFL
201: VWVQDNEGWG LSFALAALMV FVGMVVVASG LPFYRHQKPM GSPLTRIFQV FVAAFRKRKL AIPENLMEMH ELTDGTGKTA EFMERTPDFM FLDKAAVDNG
301: DKRAWSLCTV TQVEEAKIIL RMMPIFLSSI LGNVSIPLLL SLTVQQGGTM DTRLGGTSIP AASLFVVPIV FQMLTLVAYD RAIVPWLRRV TGRAGGVTHL
401: QRVGVGFVFS VMALAVAAVV EGRRRRTMAA ATPMSVFWLI PQFFLLGVMD VTSFVGLLEF FYSEASAGMK SIGGAIVFCI LGVSSWLGSF LIQVVNHATA
501: HRGGGHGRLD GANLNASRLD LFYYWLLAVF GLVSFFLYLL CSWSYVYRHD PRMQDATLDD DI
Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)
001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
Arabidopsis Description
NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.