CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G388000.1	Wheat	plasma membrane	74.85	65.98
HORVU5Hr1G095020.1	Barley	plasma membrane	74.66	65.58
TraesCS5D01G398000.1	Wheat	plasma membrane	72.71	64.2
KXG28299	Sorghum	plasma membrane	65.3	58.06
TraesCS5B01G393100.1	Wheat	plasma membrane	54.0	57.35
Os11t0282800-00	Rice	plasma membrane	67.25	57.21
EES15875	Sorghum	plasma membrane	55.56	50.09
OQU81851	Sorghum	plasma membrane	53.02	48.31
EES15876	Sorghum	plasma membrane	52.63	48.04
OQU81850	Sorghum	plasma membrane	51.07	47.64
EES15877	Sorghum	plasma membrane	52.63	47.2
KXG26617	Sorghum	plasma membrane	52.44	45.67
EES14657	Sorghum	plasma membrane	47.95	43.16
EES11151	Sorghum	plasma membrane	46.39	40.89
PGSC0003DMT400030530	Potato	mitochondrion	26.12	38.18
EES12425	Sorghum	plasma membrane	39.18	36.95
KRH51937	Soybean	plasma membrane	40.55	36.36
KRH61236	Soybean	plasma membrane	40.16	33.66
Solyc04g079510.1.1	Tomato	plasma membrane	37.43	33.63
Solyc04g079530.2.1	Tomato	plasma membrane	37.82	33.51
Solyc04g079520.2.1	Tomato	plasma membrane	38.01	33.51
PGSC0003DMT400030533	Potato	plasma membrane	38.01	33.51
PGSC0003DMT400030534	Potato	plasma membrane	37.04	32.48
KRG96656	Soybean	plasma membrane	35.28	31.42
EER89980	Sorghum	plasma membrane	36.45	31.06
KRH68384	Soybean	plasma membrane	35.09	30.93
Solyc10g039290.1.1	Tomato	plasma membrane	34.11	30.59
PGSC0003DMT400011063	Potato	cytosol	34.31	30.19
VIT_18s0001g11280.t01	Wine grape	plastid	37.43	30.19
EES12219	Sorghum	plasma membrane	34.31	29.88
PGSC0003DMT400054593	Potato	plasma membrane	35.48	29.64
EER91957	Sorghum	plasma membrane	34.31	29.58
OQU87541	Sorghum	cytosol, peroxisome, plasma membrane	35.28	29.53
KRH19434	Soybean	plasma membrane	33.92	29.49
KRH02511	Soybean	plasma membrane	33.92	29.29
VIT_14s0060g00220.t01	Wine grape	plasma membrane	35.28	29.29
EES13374	Sorghum	plasma membrane	34.31	29.28
Solyc01g102360.1.1	Tomato	plasma membrane	34.31	28.9
OQU83190	Sorghum	plasma membrane	31.77	28.8
KRH33721	Soybean	plasma membrane	33.53	28.48
PGSC0003DMT400046950	Potato	plasma membrane	33.72	28.31
EES05323	Sorghum	plasma membrane	32.94	28.31
KRG90426	Soybean	plasma membrane	33.14	28.29
KXG32694	Sorghum	cytosol	32.16	28.11
OQU93471	Sorghum	plasma membrane	32.16	27.27
KXG24751	Sorghum	peroxisome, plasma membrane, vacuole	31.97	27.24
GSMUA_Achr11P...	Banana	plasma membrane	32.75	25.42
EES00465	Sorghum	plastid	30.41	23.39
EES19057	Sorghum	plastid	6.24	12.8

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	UniProt:A0A1Z5RHV3	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:MFS_trans_sf	EnsemblPlants:OQU83318	ProteinID:OQU83318	ProteinID:OQU83318.1	PFAM:PF00854	InterPro:POT_fam
PANTHER:PTHR11654	PANTHER:PTHR11654:SF140	EnsemblPlantsGene:SORBI_3005G107400	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000B8B9B10
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:20285514..20293143

Molecular Weight (calculated)

56434.5 Da

IEP (calculated)

8.234

GRAVY (calculated)

0.451

Length

513 amino acids

Sequence
(BLAST)

001: MNMVSYLRGT MNMGVAAAST TSTMFVAVMQ MRFYTVLIFA PIEILGYILL AIQARVPSLH PPPCQAPSNC EPVHGSNLNL LLLGIFMICI GEGAIRACLP
101: ALGGDQFDKS DPVEQRLEAS FFNWYTFAVS FGGLVGLVFI VWLENNKGWD VGFAVCAGTV LLGLAVWAAG FPFYRNRLPS GSPFTRILEV LVAAFKKRNL
201: QLYNNPADGL NQITGDNAKG VEVLERTKGL QCLDKAAIDD GKQGSWSLCT VHQVEETKIV IRMIPIFITS ALGYMPASII LTFTVQQGNT MNTRLGAINV
301: PPATLFVIPT VFQLVVLVVY DRFIVPIPAQ KDCKIRTGYV GGVTHLQRIG IGFAAAIMAC GVAAIVEMNM KSVAEQSGLM DSPAPVPMSV FWLVFQFFFV
401: GVVDVTSFVG LLEFFYSEAS TGMKSIGSSL FYSMIGVAAW LVTLLIELVN RVTRDGGRKQ GWLGGANLNR SKLDSFYWLV CIIELLSFLG YLYWARRYVY
501: RNDQRVVDND QRL

Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)

001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS

Arabidopsis Description

NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.