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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • endoplasmic reticulum 2
  • mitochondrion 1
  • vacuole 2
  • extracellular 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
EpiLoc:endoplasmic reticulum
MultiLoc:mitochondrion
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d004621_P001 Maize plasma membrane 73.83 87.65
TraesCS2D01G259400.2 Wheat plasma membrane 82.32 82.04
TraesCS2A01G264500.1 Wheat plasma membrane 82.15 81.87
HORVU2Hr1G062730.7 Barley plasma membrane 81.63 81.49
TraesCS2B01G277600.1 Wheat plasma membrane 80.59 80.59
Os11t0283500-01 Rice plasma membrane 76.26 75.47
Os11t0284300-00 Rice mitochondrion 36.57 66.98
OQU83318 Sorghum mitochondrion, plasma membrane 58.06 65.3
EES15875 Sorghum plasma membrane 60.14 60.98
EES15876 Sorghum plasma membrane 57.37 58.9
EES15877 Sorghum plasma membrane 55.81 56.29
OQU81850 Sorghum plasma membrane 51.65 54.18
OQU81851 Sorghum plasma membrane 50.78 52.04
KXG26617 Sorghum plasma membrane 50.78 49.75
EES14657 Sorghum plasma membrane 45.93 46.49
EES11151 Sorghum plasma membrane 44.71 44.33
EES12425 Sorghum plasma membrane 39.69 42.1
KRH51937 Soybean plasma membrane 38.13 38.46
PGSC0003DMT400030530 Potato mitochondrion 22.53 37.04
Solyc04g079510.1.1 Tomato plasma membrane 36.4 36.78
KRH61236 Soybean plasma membrane 38.3 36.11
Solyc04g079520.2.1 Tomato plasma membrane 36.22 35.91
PGSC0003DMT400030533 Potato plasma membrane 36.22 35.91
PGSC0003DMT400030534 Potato plasma membrane 36.05 35.56
Solyc04g079530.2.1 Tomato plasma membrane 35.53 35.41
OQU87541 Sorghum cytosol, peroxisome, plasma membrane 37.26 35.07
OQU83190 Sorghum plasma membrane 34.14 34.81
Solyc10g039290.1.1 Tomato plasma membrane 34.32 34.62
EER89980 Sorghum plasma membrane 36.05 34.55
KRG96656 Soybean plasma membrane 34.32 34.38
PGSC0003DMT400011063 Potato cytosol 34.49 34.13
EES12219 Sorghum plasma membrane 34.49 33.79
KRH19434 Soybean plasma membrane 34.32 33.56
KRH68384 Soybean plasma membrane 33.8 33.51
PGSC0003DMT400054593 Potato plasma membrane 35.53 33.39
KRH02511 Soybean plasma membrane 34.14 33.16
VIT_18s0001g11280.t01 Wine grape plastid 36.4 33.02
VIT_14s0060g00220.t01 Wine grape plasma membrane 34.66 32.36
KRH33721 Soybean plasma membrane 33.45 31.95
EES13374 Sorghum plasma membrane 33.1 31.78
KRG90426 Soybean plasma membrane 33.1 31.78
Solyc01g102360.1.1 Tomato plasma membrane 33.45 31.69
KXG32694 Sorghum cytosol 31.89 31.35
PGSC0003DMT400046950 Potato plasma membrane 33.1 31.26
KXG24751 Sorghum peroxisome, plasma membrane, vacuole 32.58 31.23
EES05323 Sorghum plasma membrane 31.37 30.32
EER91957 Sorghum plasma membrane 30.5 29.58
OQU93471 Sorghum plasma membrane 30.68 29.26
EES00465 Sorghum plastid 32.93 28.49
GSMUA_Achr11P... Banana plasma membrane 32.41 28.29
EES19057 Sorghum plastid 8.84 20.4
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9UniProt:A0A1B6PRK3GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:IPR020846EnsemblPlants:KXG28299ProteinID:KXG28299ProteinID:KXG28299.1InterPro:MFS_domInterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF140EnsemblPlantsGene:SORBI_3005G107500SUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI00022071B3SEG:seg:::
Description
hypothetical protein
Coordinates
chr5:+:20304812..20309955
Molecular Weight (calculated)
63089.2 Da
IEP (calculated)
8.265
GRAVY (calculated)
0.470
Length
577 amino acids
Sequence
(BLAST)
001: MGGSSGLVDW RGRPVNPKKH GGVRASIFIH ALVLLSNAAN IANILNLVSY LREEMHMDVA KASTIASNFF AALQMFSIPA AFLADSYVKR FYTVLIFGPI
101: EILGYILLAV QAHVPSLHPP RCVSGQQTTT TCDSVHGSNL SLLLLGLYLI PIGDGAARAC LPALGGEQFD TSDPVEQRQE SSFFNWYTFS ISTGGFVGLV
201: FIVWVENSKG WDLGFVVCAL FVILGMLIWI AGLPFYRNQL PTGSPITRIL QVLVAAFKKR KVALPANPSE LKRQDDASAL EMLHRTDGFH CLDKAAVDTG
301: KAGAWTLCSV TQVEETKIIL RMVPIFLSAV LGYIPVPLIL NFTVQQGNTM DTRLGAVHIS PATLFVIPTV FQMVILVVYD RFIVPFLRRI TGYVGGVTHL
401: QRIGIGFLST IVATGIAALV EAKRKKVAED SGLVDATTGI PMSVFWLTIQ YFLLGVVDVT SFVGLLEFFY SEASMGMKSI GSSIFYCILG VSAWLGSLLI
501: QLANRFSRHS DGTGGWLDGT NLNKGKLDRF YWLLAVLEVV SLLLYGFFAW RYVYRNDQRV VVDGDNNASS DGAINVI
Best Arabidopsis Sequence Match ( AT1G69850.1 )
(BLAST)
001: MEVEEEVSRW EGYADWRNRA AVKGRHGGML AASFVLVVEI LENLAYLANA SNLVLYLREY MHMSPSKSAN DVTNFMGTAF LLALLGGFLS DAFFSTFQIF
101: LISASIEFLG LIILTIQART PSLMPPSCDS PTCEEVSGSK AAMLFVGLYL VALGVGGIKG SLASHGAEQF DESTPKGRKQ RSTFFNYFVF CLACGALVAV
201: TFVVWLEDNK GWEWGFGVST IAIFVSILIF LSGSRFYRNK IPCGSPLTTI LKVLLAASVK CCSSGSSSNA VASMSVSPSN HCVSKGKKEV ESQGELEKPR
301: QEEALPPRAQ LTNSLKVLNG AADEKPVHRL LECTVQQVED VKIVLKMLPI FACTIMLNCC LAQLSTFSVQ QAASMNTKIG SLKIPPASLP IFPVVFIMIL
401: APIYDHLIIP FARKATKTET GVTHLQRIGV GLVLSILAMA VAALVEIKRK GVAKDSGLLD SKETLPVTFL WIALQYLFLG SADLFTLAGL LEYFFTEAPS
501: SMRSLATSLS WASLAMGYYL SSVIVSIVNS ITGSSGNTPW LRGKSINRYK LDYFYWLMCV LSAANFLHYL FWAMRYKYRS TGSRS
Arabidopsis Description
NPF4.6Protein NRT1/ PTR FAMILY 4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H157]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.