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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • plasma membrane 3
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:nucleus
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400030530 Potato mitochondrion 58.55 96.58
Solyc04g079520.2.1 Tomato plasma membrane 85.66 85.22
Solyc04g079510.1.1 Tomato plasma membrane 69.95 70.93
KRH51937 Soybean plasma membrane 63.9 64.69
KRH61236 Soybean plasma membrane 63.39 59.97
VIT_18s0001g11280.t01 Wine grape plastid 63.39 57.7
Solyc10g039290.1.1 Tomato plasma membrane 43.35 43.88
Solyc01g102360.1.1 Tomato plasma membrane 44.21 42.04
Solyc03g005950.1.1 Tomato plasma membrane 43.7 40.35
Solyc05g007000.2.1 Tomato plasma membrane 38.34 39.08
Zm00001d004621_P001 Maize plasma membrane 32.12 38.27
Solyc05g006990.2.1 Tomato endoplasmic reticulum, peroxisome, plasma membrane 38.51 38.05
OQU83318 Sorghum mitochondrion, plasma membrane 33.51 37.82
TraesCS5A01G056100.1 Wheat plasma membrane 30.92 37.68
Solyc01g103030.2.1 Tomato cytosol, peroxisome, plasma membrane 39.38 37.62
Solyc11g042820.1.1 Tomato peroxisome, plasma membrane, vacuole 38.51 37.61
Solyc07g032490.2.1 Tomato plasma membrane 36.61 37.26
Solyc04g005790.2.1 Tomato plasma membrane 37.31 37.18
EES15876 Sorghum plasma membrane 35.92 37.01
Os04t0491500-02 Rice plasma membrane 35.58 36.98
HORVU2Hr1G062730.7 Barley plasma membrane 36.44 36.51
TraesCS5A01G388000.1 Wheat plasma membrane 36.61 36.43
EES15875 Sorghum plasma membrane 35.75 36.38
TraesCS2D01G259400.2 Wheat plasma membrane 36.27 36.27
Zm00001d041163_P001 Maize plasma membrane 35.92 36.11
TraesCS2A01G264500.1 Wheat plasma membrane 36.1 36.1
Solyc01g096880.2.1 Tomato plasma membrane 35.75 36.06
TraesCS2B01G277600.1 Wheat plasma membrane 35.92 36.05
TraesCS5D01G067100.1 Wheat plasma membrane 34.89 36.01
TraesCS5B01G060800.1 Wheat plasma membrane 34.72 35.83
HORVU5Hr1G095020.1 Barley plasma membrane 36.1 35.79
TraesCS5A01G056200.2 Wheat plasma membrane 34.72 35.77
KXG28299 Sorghum plasma membrane 35.41 35.53
Zm00001d003208_P001 Maize plasma membrane 28.15 35.51
OQU81850 Sorghum plasma membrane 33.68 35.45
TraesCS2B01G368700.1 Wheat plasma membrane 34.2 35.42
TraesCS5B01G060500.1 Wheat plasma membrane 34.2 35.36
TraesCS2A01G350100.1 Wheat plasma membrane 34.02 35.24
TraesCS5D01G067400.1 Wheat plasma membrane 34.02 35.12
TraesCS2D01G348600.1 Wheat plasma membrane 33.85 35.06
TraesCS2D01G348500.1 Wheat plasma membrane 33.85 35.06
TraesCS5D01G398000.1 Wheat plasma membrane 35.06 34.94
HORVU2Hr1G085210.21 Barley plasma membrane 33.85 34.94
TraesCS2A01G350300.1 Wheat plasma membrane 31.95 34.84
KXG26617 Sorghum plasma membrane 35.23 34.63
EES15877 Sorghum plasma membrane 34.2 34.62
Os11t0282800-00 Rice plasma membrane 35.92 34.49
OQU81851 Sorghum plasma membrane 33.51 34.46
EES14657 Sorghum plasma membrane 33.51 34.04
Solyc03g113250.2.1 Tomato plasma membrane 35.75 33.93
Solyc08g078950.2.1 Tomato cytosol, peroxisome, plasma membrane 34.37 33.73
TraesCS5B01G393100.1 Wheat plasma membrane 27.98 33.54
Solyc08g061010.2.1 Tomato plasma membrane 15.37 33.46
Os12t0231000-01 Rice plasma membrane 33.68 33.45
Os11t0283500-01 Rice plasma membrane 33.68 33.45
EES11151 Sorghum plasma membrane 33.51 33.33
Os11t0284300-00 Rice mitochondrion 18.13 33.33
TraesCS2B01G368600.2 Wheat plasma membrane 33.33 33.22
Solyc12g006050.1.1 Tomato cytosol, peroxisome, plasma membrane 33.51 32.77
Solyc07g049290.2.1 Tomato nucleus 33.16 32.49
Solyc06g060620.2.1 Tomato plasma membrane 33.16 32.43
HORVU2Hr1G007730.1 Barley mitochondrion 19.69 32.39
Solyc08g007430.1.1 Tomato cytosol, peroxisome, plasma membrane 32.82 32.2
Solyc08g061020.1.1 Tomato plasma membrane 16.58 32.0
TraesCS2A01G350000.1 Wheat plasma membrane 28.32 30.31
TraesCS2B01G368500.1 Wheat plasma membrane 27.98 29.45
EES12425 Sorghum plasma membrane 27.63 29.41
TraesCS2B01G368400.1 Wheat plasma membrane 27.81 29.27
Zm00001d025748_P001 Maize plasma membrane 27.63 29.14
TraesCS2D01G348400.1 Wheat plasma membrane 27.63 29.09
HORVU2Hr1G085260.3 Barley plasma membrane 22.8 25.73
Os04t0491200-00 Rice plasma membrane, vacuole 21.42 18.93
Os04t0491350-00 Rice plasma membrane 0.52 0.65
Protein Annotations
MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:IPR020846UniProt:K4BV37
InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF113
SUPFAM:SSF103473EnsemblPlantsGene:Solyc04g079530.2EnsemblPlants:Solyc04g079530.2.1TMHMM:TMhelixUniParc:UPI00027671AFSEG:seg
Description
No Description!
Coordinates
chr4:+:63965072..63967579
Molecular Weight (calculated)
64235.1 Da
IEP (calculated)
8.839
GRAVY (calculated)
0.221
Length
579 amino acids
Sequence
(BLAST)
001: MGICRNVETE ENKLQSKGGT RAALFVYVMA GINTMALISN GVSLVIYFNG YMNFSLTKSA NTVTNFMGTA FLLSLFGAFL SDTYFSRFKT CVLFGIIKVL
101: GFALLGVQAH FSQLRPFPCR DVPLSQNDRC ESADAGQLAI LYGGVYLIAL GNSGVKAALP SLGADQFDEK DPKEAAKLSS YFNWLLFYNT IGAILGITVL
201: VWISDNQGWD WSFGICSVAV GLSILLLTMG KQFYRCNVPK GSPLMRIPQV FVAAFRNRNL PLPQNKDDLH QIRSGEPENG TEILQRTDQF KFLDRAAILR
301: NNQEASTTSA HGPWSLCTIS QVEETKIVVR MLPIILSTVF MNTCMAQFQT FTIQQSMTMN RKIQNFEIPG PSIPVIPQLF QLFLIPVYDR IFVPIARKFT
401: GIPSGIQQLQ RIGAGQVLSA VSMAVAAVVE SHRKSVSIKH NMVDSASPLP MSVFWLGYQF VIAAMAQIFT IVGLMNFFYA ESTSGLKSLS MAISWSSTAF
501: GYFTSSVVVS VINKVSGGWL ANNNLNRDKL DYFYWLLAGV SVLNFGFYLL CASWYKYKKP ELKQEDHITD ENDKGITDV
Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)
001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
Arabidopsis Description
NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.