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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G388000.1 Wheat plasma membrane 88.53 88.83
TraesCS5D01G398000.1 Wheat plasma membrane 86.82 87.26
TraesCS5B01G393100.1 Wheat plasma membrane 65.24 78.88
OQU83318 Sorghum mitochondrion, plasma membrane 65.58 74.66
HORVU2Hr1G062730.7 Barley plasma membrane 67.98 68.69
Os11t0282800-00 Rice plasma membrane 67.64 65.51
HORVU2Hr1G085210.21 Barley plasma membrane 51.37 53.48
HORVU2Hr1G007730.1 Barley mitochondrion 29.11 48.3
KRH51937 Soybean plasma membrane 39.55 40.38
Solyc04g079510.1.1 Tomato plasma membrane 37.16 38.0
KRH61236 Soybean plasma membrane 39.73 37.91
PGSC0003DMT400030530 Potato mitochondrion 22.77 37.89
HORVU3Hr1G071510.1 Barley golgi, plasma membrane 36.82 37.65
PGSC0003DMT400030534 Potato plasma membrane 37.16 37.09
HORVU2Hr1G085260.3 Barley plasma membrane 31.85 36.26
Solyc04g079530.2.1 Tomato plasma membrane 35.79 36.1
PGSC0003DMT400030533 Potato plasma membrane 35.79 35.91
Solyc04g079520.2.1 Tomato plasma membrane 35.62 35.74
VIT_18s0001g11280.t01 Wine grape plastid 38.18 35.06
KRG96656 Soybean plasma membrane 34.42 34.9
KRH68384 Soybean plasma membrane 34.08 34.19
Solyc10g039290.1.1 Tomato plasma membrane 33.05 33.74
KRH19434 Soybean plasma membrane 33.9 33.56
HORVU2Hr1G081050.1 Barley endoplasmic reticulum, extracellular 3.94 33.33
HORVU7Hr1G086170.5 Barley cytosol, peroxisome, plastid 35.79 33.12
KRH02511 Soybean plasma membrane 33.56 33.0
HORVU5Hr1G099170.6 Barley plasma membrane 34.42 32.95
PGSC0003DMT400011063 Potato cytosol 32.88 32.93
HORVU4Hr1G015640.2 Barley golgi, peroxisome, plasma membrane 33.56 32.5
PGSC0003DMT400054593 Potato plasma membrane 34.08 32.41
KRH33721 Soybean plasma membrane 33.39 32.28
HORVU2Hr1G098210.2 Barley mitochondrion, plasma membrane 16.95 32.25
KRG90426 Soybean plasma membrane 33.05 32.11
VIT_14s0060g00220.t01 Wine grape plasma membrane 33.9 32.04
Solyc01g102360.1.1 Tomato plasma membrane 33.22 31.86
HORVU1Hr1G053990.4 Barley peroxisome 33.22 31.44
HORVU7Hr1G071600.2 Barley mitochondrion 33.39 31.4
PGSC0003DMT400046950 Potato plasma membrane 32.53 31.1
HORVU1Hr1G004720.4 Barley plasma membrane 29.79 30.16
HORVU4Hr1G088020.4 Barley nucleus, plasma membrane 31.68 29.79
GSMUA_Achr11P... Banana plasma membrane 32.19 28.44
HORVU1Hr1G054020.3 Barley mitochondrion, peroxisome, plastid 25.34 27.11
HORVU3Hr1G014510.3 Barley plastid 29.97 26.84
HORVU2Hr1G065480.1 Barley golgi, plasma membrane 10.1 26.22
HORVU2Hr1G076880.23 Barley golgi, peroxisome 22.77 22.66
Protein Annotations
EnsemblPlants:HORVU5Hr1G095020.1EnsemblPlantsGene:HORVU5Hr1G095020Gene3D:1.20.1250.20GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:MFS_trans_sfInterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF140PFAM:PF00854SEG:seg
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000B473053UniProt:A0A287SCG8MapMan:24.2.2.9:
Description
No Description!
Coordinates
chrchr5H:+:597489383..597494294
Molecular Weight (calculated)
62996.9 Da
IEP (calculated)
6.399
GRAVY (calculated)
0.446
Length
584 amino acids
Sequence
(BLAST)
001: MGSSFGLVDF RGRPVDTGRH GGVRASMFIY IMVWLGNVVN VANNMNMVSY LRGTMNMGVA AAATTSTNFL AALQMFTIPA AFLADSYIKR FYTVLIFAPV
101: EILGYILLAV QAHVPSLHPP ACSPSEPQSC EPVHGANLSL LLLGIYMICI GEGAIRACLP ALGGDQFDNA DPVERRLEAS FFNWYTFSVS MGAFFGLIFI
201: VWLENNKGWD VGFAVCAGIV LLGLLIWAAG FPFYRNQLPA GSPITRIMQV IVVAWKKRNL KLPANPDDLN QMTGDDAEGL EVLHRTEGLQ FLEKAAIIDN
301: GARGSWSLCD VTQVEETKIV CRMIPIFLTS ALGYTPVSII LSFTVQQGNT MDTRLGAIRV SPATLXXXXX XCLIPTIFQL VILVVYDRLL VPLLRRATGY
401: VGGVTHLQRI GVGFVATVLA SAAAALVETR RKGVAEGSGL VDSPAGVPMS VFWLTPQFFL LGVVDVTSFV GLLEFFYSEA SAGMKSIGSS VFYCMLGLSA
501: WFSTLTIQLV NRVTRHGDGE AGWLDGANLN RSRLDSFYWL VCVLELVSSV VYLFLARRYL YRNDQRVAAE DDKEIPSAGY VDGT
Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)
001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
Arabidopsis Description
NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.