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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • mitochondrion 1
  • cytosol 1
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:cytosol
TargetP:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G365100.1 Wheat plasma membrane 88.91 95.57
TraesCS7D01G357300.2 Wheat plasma membrane 90.65 92.56
Os06t0581000-01 Rice plasma membrane 81.3 86.95
TraesCS7B01G262200.1 Wheat plasma membrane, plastid 93.66 85.65
EER89980 Sorghum plasma membrane 80.03 83.89
Zm00001d046383_P001 Maize plasma membrane 78.13 83.28
Zm00001d036942_P001 Maize plasma membrane 68.94 80.56
Zm00001d036941_P001 Maize plasma membrane 76.7 79.47
GSMUA_Achr7P08880_001 Banana plasma membrane 63.23 72.15
CDY40277 Canola plasma membrane 28.21 69.8
Bra012431.1-P Field mustard plasma membrane 28.21 69.8
KRH69373 Soybean plasma membrane 62.76 68.28
KRH74766 Soybean plasma membrane 62.6 68.22
KRG99175 Soybean plasma membrane 63.23 68.21
KRH45840 Soybean plasma membrane 63.71 67.68
VIT_01s0026g01570.t01 Wine grape plasma membrane 62.44 67.35
Solyc05g007000.2.1 Tomato plasma membrane 60.54 67.25
PGSC0003DMT400045415 Potato plasma membrane 60.7 66.61
PGSC0003DMT400007441 Potato plasma membrane 61.49 66.44
KRH45842 Soybean plasma membrane 62.28 66.16
AT1G69850.1 Thale cress plasma membrane 61.33 66.15
Solyc04g005790.2.1 Tomato plasma membrane 60.86 66.09
Solyc05g006990.2.1 Tomato endoplasmic reticulum, peroxisome, plasma membrane 61.33 66.04
CDY11649 Canola cytosol, peroxisome, plasma membrane 61.33 65.04
AT1G27040.1 Thale cress plasma membrane 58.32 64.9
GSMUA_Achr2P16840_001 Banana plasma membrane, plastid 61.81 64.68
KRH03418 Soybean plasma membrane 59.27 64.26
CDY40278 Canola plasma membrane 59.27 64.04
KRH56961 Soybean plasma membrane 59.11 63.98
CDY28437 Canola plasma membrane 58.8 63.53
PGSC0003DMT400045412 Potato mitochondrion 63.07 63.48
VIT_17s0000g05640.t01 Wine grape cytosol, plasma membrane, plastid 60.86 62.95
GSMUA_Achr6P00820_001 Banana plasma membrane 62.44 62.34
PGSC0003DMT400065182 Potato plasma membrane 56.89 60.95
Bra010117.1-P Field mustard plasma membrane 53.57 60.9
CDY38765 Canola plasma membrane 61.97 60.15
CDY00323 Canola plasma membrane 53.72 60.11
CDX84348 Canola plasma membrane 53.57 59.93
AT5G62730.1 Thale cress plasma membrane 54.36 58.23
Solyc03g113250.2.1 Tomato plasma membrane 51.66 53.44
HORVU3Hr1G071510.1 Barley golgi, plasma membrane 37.88 41.86
HORVU2Hr1G085210.21 Barley plasma membrane 34.71 39.04
HORVU7Hr1G071600.2 Barley mitochondrion 36.45 37.04
HORVU2Hr1G098210.2 Barley mitochondrion, plasma membrane 17.75 36.48
HORVU4Hr1G015640.2 Barley golgi, peroxisome, plasma membrane 34.55 36.15
HORVU1Hr1G004720.4 Barley plasma membrane 32.81 35.88
HORVU5Hr1G095020.1 Barley plasma membrane 33.12 35.79
HORVU2Hr1G062730.7 Barley plasma membrane 32.33 35.29
HORVU4Hr1G088020.4 Barley nucleus, plasma membrane 34.71 35.27
HORVU1Hr1G053990.4 Barley peroxisome 34.23 35.01
HORVU5Hr1G099170.6 Barley plasma membrane 32.65 33.77
HORVU2Hr1G081050.1 Barley endoplasmic reticulum, extracellular 3.65 33.33
HORVU2Hr1G007730.1 Barley mitochondrion 18.07 32.39
HORVU2Hr1G065480.1 Barley golgi, plasma membrane 11.09 31.11
HORVU1Hr1G054020.3 Barley mitochondrion, peroxisome, plastid 25.36 29.3
HORVU3Hr1G014510.3 Barley plastid 29.32 28.37
HORVU2Hr1G085260.3 Barley plasma membrane 21.08 25.93
HORVU2Hr1G076880.23 Barley golgi, peroxisome 22.03 23.68
Protein Annotations
EnsemblPlants:HORVU7Hr1G086170.5EnsemblPlantsGene:HORVU7Hr1G086170GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:MFS_trans_sf
InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF98PFAM:PF00854SEG:segSUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI000B463F74UniProt:A0A287X6F9MapMan:11.1.4.1MapMan:24.2.2.9:
Description
No Description!
Coordinates
chrchr7H:+:520946216..520953600
Molecular Weight (calculated)
68245.3 Da
IEP (calculated)
8.975
GRAVY (calculated)
0.316
Length
631 amino acids
Sequence
(BLAST)
001: QAVTHTRRSP EPESCRTAST LHPAVQALRV HTHTRCGLMR RGEAGGAMED GAREVERWEG YVDWRSRPAV KGRHGGMAAA SFVLVAEVLE NLAFLANASN
101: LVTYLMKSMH YSPAQSATTV TNFMGTAFLL GLFGGFLSDA VCTTYAVYLI SAFVEFMGLV VLMIQARSPS LMPPECAKAA GALHCEPVSG SKKAMMFVGL
201: YLTALGIGGI KGSLPSHGAE QFDEHTPRGR KGRSTFFNYY VFCLSCGALI AVTFAVWVED NKGWQWGFGI STIAILLSIP VFAAGSKFYR SKVPTGSPLV
301: TIGKVLLAAA FARRGGTQSA SNGAVIDRAP SPTGSTDMKE YCKPGDAGAA DEVTEPSQEL SVLNRAVQCQ PRHRALACTV QEVEDVKIVL MVLPIFLSTI
401: MLNCCLAQLS TFSVEQAATM NTHVGRLKVP PASLPVFPVT FIILLAPIYD HIIVPFARRV TGTEMGITHL QRIGTGLVLS IVAMAVAAVV EVKRKNVATD
501: AGMTDSGAPL PITFFWIAFQ YLFLGSADLF TLAGLLEFFF SEAPPRMRSL ATSLSWASLA LGYYLSSVLV TVVNSATGRG GHRPWLEGAS LNHYHLERFY
601: WLMCVLSALN YVFFLVLAIR YKYRNAGVIK G
Best Arabidopsis Sequence Match ( AT1G69850.1 )
(BLAST)
001: MEVEEEVSRW EGYADWRNRA AVKGRHGGML AASFVLVVEI LENLAYLANA SNLVLYLREY MHMSPSKSAN DVTNFMGTAF LLALLGGFLS DAFFSTFQIF
101: LISASIEFLG LIILTIQART PSLMPPSCDS PTCEEVSGSK AAMLFVGLYL VALGVGGIKG SLASHGAEQF DESTPKGRKQ RSTFFNYFVF CLACGALVAV
201: TFVVWLEDNK GWEWGFGVST IAIFVSILIF LSGSRFYRNK IPCGSPLTTI LKVLLAASVK CCSSGSSSNA VASMSVSPSN HCVSKGKKEV ESQGELEKPR
301: QEEALPPRAQ LTNSLKVLNG AADEKPVHRL LECTVQQVED VKIVLKMLPI FACTIMLNCC LAQLSTFSVQ QAASMNTKIG SLKIPPASLP IFPVVFIMIL
401: APIYDHLIIP FARKATKTET GVTHLQRIGV GLVLSILAMA VAALVEIKRK GVAKDSGLLD SKETLPVTFL WIALQYLFLG SADLFTLAGL LEYFFTEAPS
501: SMRSLATSLS WASLAMGYYL SSVIVSIVNS ITGSSGNTPW LRGKSINRYK LDYFYWLMCV LSAANFLHYL FWAMRYKYRS TGSRS
Arabidopsis Description
NPF4.6Protein NRT1/ PTR FAMILY 4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H157]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.