Factsheet for PGSC0003DMT400045412

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	vacuole
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g006990.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	87.4	93.52
PGSC0003DMT400045415	Potato	plasma membrane	81.18	88.52
PGSC0003DMT400007441	Potato	plasma membrane	74.64	80.14
KRH69373	Soybean	plasma membrane	68.74	74.31
KRH74766	Soybean	plasma membrane	67.62	73.23
KRG99175	Soybean	plasma membrane	67.78	72.65
VIT_01s0026g01570.t01	Wine grape	plasma membrane	67.3	72.14
KRH45840	Soybean	plasma membrane	67.78	71.55
GSMUA_Achr7P08880_001	Banana	plasma membrane	62.52	70.89
KRH45842	Soybean	plasma membrane	66.19	69.87
Zm00001d046383_P001	Maize	plasma membrane	63.96	67.74
Os06t0581000-01	Rice	plasma membrane	63.64	67.63
TraesCS7A01G365100.1	Wheat	plasma membrane	63.0	67.29
EER89980	Sorghum	plasma membrane	63.48	66.11
PGSC0003DMT400065182	Potato	plasma membrane	60.92	64.86
TraesCS7D01G357300.2	Wheat	plasma membrane	63.16	64.08
GSMUA_Achr2P16840_001	Banana	plasma membrane, plastid	61.24	63.68
Zm00001d036942_P001	Maize	plasma membrane	54.55	63.33
HORVU7Hr1G086170.5	Barley	cytosol, peroxisome, plastid	63.48	63.07
Zm00001d036941_P001	Maize	plasma membrane	60.45	62.23
GSMUA_Achr6P00820_001	Banana	plasma membrane	61.88	61.39
TraesCS7B01G262200.1	Wheat	plasma membrane, plastid	63.64	57.83
PGSC0003DMT400030533	Potato	plasma membrane	37.32	40.21
PGSC0003DMT400030534	Potato	plasma membrane	37.32	40.0
PGSC0003DMT400030530	Potato	mitochondrion	21.85	39.03
PGSC0003DMT400011063	Potato	cytosol	35.73	38.42
PGSC0003DMT400053373	Potato	cytosol, peroxisome, plasma membrane	37.0	38.35
PGSC0003DMT400012226	Potato	cytosol, peroxisome, plasma membrane	35.25	37.46
PGSC0003DMT400070732	Potato	plasma membrane	34.29	37.39
PGSC0003DMT400046950	Potato	plasma membrane	36.36	37.32
PGSC0003DMT400054593	Potato	plasma membrane	35.57	36.32
PGSC0003DMT400032493	Potato	cytosol, peroxisome, plasma membrane	34.13	36.27
PGSC0003DMT400082762	Potato	plasma membrane	25.68	35.62
PGSC0003DMT400075163	Potato	plasma membrane	32.54	35.17
PGSC0003DMT400010957	Potato	cytosol, peroxisome, plasma membrane	33.01	34.97
PGSC0003DMT400035882	Potato	plasma membrane	33.01	34.97
PGSC0003DMT400053569	Potato	endoplasmic reticulum, plasma membrane	14.67	34.59
PGSC0003DMT400001784	Potato	cytosol, peroxisome, plasma membrane	32.7	34.57
PGSC0003DMT400071504	Potato	plasma membrane	31.1	32.66
PGSC0003DMT400072037	Potato	cytosol, peroxisome, plasma membrane	31.1	29.86

Protein Annotations

MapMan:11.1.4.1	MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	UniProt:M1BHM4
InterPro:MFS_trans_sf	PFAM:PF00854	EnsemblPlantsGene:PGSC0003DMG400017620	PGSC:PGSC0003DMG400017620	EnsemblPlants:PGSC0003DMT400045412	InterPro:POT_fam
PANTHER:PTHR11654	PANTHER:PTHR11654:SF98	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000294904F	SEG:seg

Description

Nitrate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400017620]

Coordinates

chr5:-:6018942..6027657

Molecular Weight (calculated)

68501.9 Da

IEP (calculated)

8.931

GRAVY (calculated)

0.464

Length

627 amino acids

Sequence
(BLAST)

001: MLIAISSGTY WYVRIQLVGR GWLTQVFRIV RNGHLLHDSL TPPKETESQS QLSTWHGYVD WKNRPALTKK HGGLLAASFV LVVEVLENLA FLANASNLVL
101: YMSEYMHFSP SKSANSVTNF MGTAFLLALL GGFLSDAVCT TYYIYLISAL IEFMGLVVLT IQARSGSLKP PTCDLQAAPN VPCEQVHGAQ AAMLFIGLYL
201: VALGVGGIKG SLPPHGAEQF DEATPQGRKQ RSTFFNYFVF CLSFGALIAV TFVVWVEDNK GWQWGFGIST FAIFLSIPIF LAGSSFYRNK IPCGSPLTTI
301: SKVLIAALVN SGVSRNSTTA IVSMTSSPSP PIPTVKEGGE DSNREGVGSI HTPSTSLSFL NRAVSDTPAC SALECSVQQV EEVKIVMKIL PIFACTIMLN
401: CCLAQLSTFS VQQAASMNTK VGSLKVPPAS LPVFPVVFIM ILAPVYDHFI IPFARRVTKT EMGISHLQRI GIGLFLSIVA MAIAALVEIK RKGVVTDSGL
501: LDSAKPLPIT FFWIAFQYLF LGSADLFVLA GLLEFCFSEA PVSMRSLATS LSWASLAIGY YLSSVIVSIV NRVTGISTNK PWLAGSNLNH YHLERFYWLM
601: CILSALNFMH YLFWAAKYKY TTVKSSK

Best Arabidopsis Sequence Match ( AT1G69850.1 )
(BLAST)

001: MEVEEEVSRW EGYADWRNRA AVKGRHGGML AASFVLVVEI LENLAYLANA SNLVLYLREY MHMSPSKSAN DVTNFMGTAF LLALLGGFLS DAFFSTFQIF
101: LISASIEFLG LIILTIQART PSLMPPSCDS PTCEEVSGSK AAMLFVGLYL VALGVGGIKG SLASHGAEQF DESTPKGRKQ RSTFFNYFVF CLACGALVAV
201: TFVVWLEDNK GWEWGFGVST IAIFVSILIF LSGSRFYRNK IPCGSPLTTI LKVLLAASVK CCSSGSSSNA VASMSVSPSN HCVSKGKKEV ESQGELEKPR
301: QEEALPPRAQ LTNSLKVLNG AADEKPVHRL LECTVQQVED VKIVLKMLPI FACTIMLNCC LAQLSTFSVQ QAASMNTKIG SLKIPPASLP IFPVVFIMIL
401: APIYDHLIIP FARKATKTET GVTHLQRIGV GLVLSILAMA VAALVEIKRK GVAKDSGLLD SKETLPVTFL WIALQYLFLG SADLFTLAGL LEYFFTEAPS
501: SMRSLATSLS WASLAMGYYL SSVIVSIVNS ITGSSGNTPW LRGKSINRYK LDYFYWLMCV LSAANFLHYL FWAMRYKYRS TGSRS

Arabidopsis Description

NPF4.6Protein NRT1/ PTR FAMILY 4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H157]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.