Factsheet for PGSC0003DMT400053373

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g103030.2.1	Tomato	cytosol, peroxisome, plasma membrane	97.52	97.36
KRH51284	Soybean	plasma membrane	69.59	74.25
KRH01875	Soybean	plasma membrane	65.62	73.65
AT1G59740.1	Thale cress	plasma membrane	71.24	72.93
VIT_12s0035g01820.t01	Wine grape	golgi, peroxisome, plasma membrane	73.22	72.62
KRH26263	Soybean	cytosol, peroxisome, plasma membrane	72.89	72.06
Bra035429.1-P	Field mustard	plasma membrane	70.74	72.05
Bra027836.1-P	Field mustard	plasma membrane	71.07	71.31
CDY45893	Canola	golgi, peroxisome, plasma membrane	55.7	70.65
CDY65523	Canola	plastid	37.52	70.06
CDY45147	Canola	mitochondrion	37.85	68.98
CDY70795	Canola	plasma membrane	35.54	68.04
PGSC0003DMT400082762	Potato	plasma membrane	50.58	67.7
CDY67653	Canola	peroxisome	39.5	65.84
TraesCS2A01G309100.1	Wheat	plasma membrane	62.15	64.83
TraesCS2B01G326200.1	Wheat	plasma membrane	61.82	64.48
TraesCS2D01G307400.1	Wheat	plasma membrane	61.98	64.43
EES12219	Sorghum	plasma membrane	61.49	63.16
Zm00001d003603_P001	Maize	plasma membrane	60.66	62.2
Os04t0441800-01	Rice	plasma membrane	61.16	60.56
KXG24751	Sorghum	peroxisome, plasma membrane, vacuole	53.88	54.15
Zm00001d049349_P001	Maize	mitochondrion	52.89	44.63
HORVU2Hr1G076880.23	Barley	golgi, peroxisome	40.0	41.23
PGSC0003DMT400030530	Potato	mitochondrion	23.47	40.46
PGSC0003DMT400007441	Potato	plasma membrane	38.84	40.24
PGSC0003DMT400045415	Potato	plasma membrane	38.02	40.0
PGSC0003DMT400030533	Potato	plasma membrane	38.18	39.69
PGSC0003DMT400030534	Potato	plasma membrane	37.69	38.97
PGSC0003DMT400011063	Potato	cytosol	37.52	38.94
PGSC0003DMT400046950	Potato	plasma membrane	39.17	38.79
PGSC0003DMT400075163	Potato	plasma membrane	36.69	38.28
PGSC0003DMT400070732	Potato	plasma membrane	36.2	38.09
PGSC0003DMT400065182	Potato	plasma membrane	36.2	37.18
PGSC0003DMT400045412	Potato	mitochondrion	38.35	37.0
PGSC0003DMT400054593	Potato	plasma membrane	37.52	36.97
PGSC0003DMT400001784	Potato	cytosol, peroxisome, plasma membrane	36.2	36.93
PGSC0003DMT400012226	Potato	cytosol, peroxisome, plasma membrane	35.87	36.78
PGSC0003DMT400071504	Potato	plasma membrane	36.2	36.68
PGSC0003DMT400010957	Potato	cytosol, peroxisome, plasma membrane	35.87	36.66
PGSC0003DMT400032493	Potato	cytosol, peroxisome, plasma membrane	35.54	36.44
PGSC0003DMT400035882	Potato	plasma membrane	34.71	35.47
PGSC0003DMT400053569	Potato	endoplasmic reticulum, plasma membrane	15.21	34.59
PGSC0003DMT400072037	Potato	cytosol, peroxisome, plasma membrane	31.57	29.25

Protein Annotations

EntrezGene:102603731	MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
UniProt:M1BUV8	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	EnsemblPlantsGene:PGSC0003DMG400020708	PGSC:PGSC0003DMG400020708
EnsemblPlants:PGSC0003DMT400053373	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF187	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI000296BC20	RefSeq:XP_006349278.1	SEG:seg	:	:	:

Description

Peptide/nitrate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400020708]

Coordinates

chr1:-:79794672..79799593

Molecular Weight (calculated)

67008.9 Da

IEP (calculated)

8.688

GRAVY (calculated)

0.310

Length

605 amino acids

Sequence
(BLAST)

001: MEMMEAAARG DNNNNNSCED VIITTTTTSV DWRGRPSNPI KHGGMKAAAF VLGLQGFEIM GIAAVGNNLI TYVINEMHFS LSESANIVTN FIGTIFILSL
101: LGGYLSDSYL ASFWTILIFG FIELSGFILL SVQAHLPQLK PPKCNMLTDG DKCVEAKGFK ALIFFVALYL VALGSGCVKP NMIAHGGDQF NQENPKQSKQ
201: LSRYFNAAYF AFSMGELIAL TILVYVQTHS GMDVGFGVSA AAMALGLICL VCGTLFYRNK PPQGSIFTPI AQVMVAAFLN RKLVSPSDAH MLHKAHPTKA
301: LPNANPTINL LHTNRFRFLD KACTKMQDGN TTKEISRWRL CTVTQVEQVK ILISVLPIFA CTIIFNTILA QLQTFSVQQG STMNTKLTKN FHIPPASLQS
401: IPYIMLIFIV PLYDTFFVPF ARKFTGHESG ITPLQRIGVG LFFATFSMVS AALMENKRRI SAVELNETLS IFWITPQFLI FGISEMFTAV GLIEFFYKQS
501: LKGSMQSFLT AITYCSYSFG FYLSSLLVSL VNKITSSHHG GGWLSDNNLN KDRLDLFYWL LAILSLLNFF NYLFWAKWYS KNGCSSSATT NQELNSKVVG
601: EDGIV

Best Arabidopsis Sequence Match ( AT1G59740.1 )
(BLAST)

001: MAEINKQSNK WEQEEVSNEN NWELAEEESV DWRGRPSNPN KHGGMRAALF VLGLQAFEIM GIAAVGNNLI TYVINEMHFP LSKAANIVTN FVGTIFIFAL
101: LGGYLSDAFL GSFWTIIIFG FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN MIAHGADQFS QSHPKQSKRL
201: SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND
301: VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM
401: LIFLVPLYDS FLVPFARKLT GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE MFTAVGLIEF FYKQSAKGME
501: SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I

Arabidopsis Description

NPF4.3Protein NRT1/ PTR FAMILY 4.3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VV5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.