CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
cytosol 1
vacuole 2
extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51284	Soybean	plasma membrane	73.37	79.19
KRH01875	Soybean	plasma membrane	69.28	78.66
VIT_12s0035g01820.t01	Wine grape	golgi, peroxisome, plasma membrane	72.71	72.95
PGSC0003DMT400053373	Potato	cytosol, peroxisome, plasma membrane	72.06	72.89
Solyc01g103030.2.1	Tomato	cytosol, peroxisome, plasma membrane	71.41	72.11
AT1G59740.1	Thale cress	plasma membrane	68.95	71.4
Bra027836.1-P	Field mustard	plasma membrane	68.63	69.65
Bra035429.1-P	Field mustard	plasma membrane	67.16	69.19
CDY65523	Canola	plastid	36.44	68.83
CDY45147	Canola	mitochondrion	36.44	67.17
CDY45893	Canola	golgi, peroxisome, plasma membrane	52.29	67.09
CDY70795	Canola	plasma membrane	34.15	66.14
TraesCS2A01G309100.1	Wheat	plasma membrane	61.6	65.0
TraesCS2D01G307400.1	Wheat	plasma membrane	61.6	64.78
CDY67653	Canola	peroxisome	38.4	64.74
TraesCS2B01G326200.1	Wheat	plasma membrane	61.11	64.48
EES12219	Sorghum	plasma membrane	60.78	63.16
Zm00001d003603_P001	Maize	plasma membrane	60.78	63.05
Os04t0441800-01	Rice	plasma membrane	61.6	61.7
KXG24751	Sorghum	peroxisome, plasma membrane, vacuole	53.43	54.32
Zm00001d049349_P001	Maize	mitochondrion	52.78	45.05
KRH51937	Soybean	plasma membrane	39.22	41.96
HORVU2Hr1G076880.23	Barley	golgi, peroxisome	39.71	41.4
KRG96656	Soybean	plasma membrane	37.91	40.28
KRG99175	Soybean	plasma membrane	38.07	39.83
KRH68384	Soybean	plasma membrane	37.75	39.69
KRH45840	Soybean	plasma membrane	38.24	39.39
KRH61236	Soybean	plasma membrane	39.38	39.38
KRH45842	Soybean	plasma membrane	38.07	39.23
KRH74766	Soybean	plasma membrane	36.76	38.86
KRG90426	Soybean	plasma membrane	38.07	38.77
KRH42929	Soybean	plasma membrane	38.07	38.64
KRH69373	Soybean	plasma membrane	36.6	38.62
KRH33721	Soybean	plasma membrane	37.91	38.41
KRH59041	Soybean	plasma membrane	37.09	38.22
KRH56961	Soybean	plasma membrane	36.11	37.91
KRH03418	Soybean	plasma membrane	35.78	37.63
KRH21158	Soybean	plasma membrane	36.44	37.48
KRH11088	Soybean	plasma membrane	36.6	37.4
KRH77380	Soybean	cytosol, plasma membrane, plastid	35.62	37.2
KRH28055	Soybean	plasma membrane	35.46	37.03
KRH04097	Soybean	peroxisome	35.13	36.2
KRH02511	Soybean	plasma membrane	34.97	36.03
KRH20280	Soybean	plasma membrane	33.99	35.8
KRH19434	Soybean	plasma membrane	34.48	35.76
KRH03705	Soybean	plasma membrane	33.99	35.56
KRH14759	Soybean	plasma membrane	33.01	34.41
KRH57369	Soybean	plasma membrane	33.01	34.24
KRH73378	Soybean	cytosol, peroxisome, plasma membrane	32.84	34.18
KRH01794	Soybean	cytosol, peroxisome, plasma membrane	30.39	29.48

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100792350	MapMan:24.2.2.9	EMBL:ACUP02007701	EnsemblPlantsGene:GLYMA_12G163800	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006857	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	UniProt:I1LT88	InterPro:IPR020846	EnsemblPlants:KRH26263
ProteinID:KRH26263	ProteinID:KRH26263.1	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam
ScanProsite:PS01022	PANTHER:PTHR11654	PANTHER:PTHR11654:SF187	InterPro:PTR2_symporter_CS	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI000233D190	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:31830738..31835845

Molecular Weight (calculated)

67513.6 Da

IEP (calculated)

8.097

GRAVY (calculated)

0.241

Length

612 amino acids

Sequence
(BLAST)

001: MDEVGRKESE YQIKGGGDNE DSMSMSVACG VINTVDWRGR PSNPNVHGGT RASAFVLGLQ ACEIMAIAAV GNNLITYVIN EMHFSLSKSA NVVTNFVGTI
101: FLLALLGGYL SDSYLGSFWT ILIFGFVELS GFILLSVQAH LPQLKPPPCN MFFDGEHCTE AKGFKALIFF LAIYLVALGS GCVKPNMIAH GADQFNQENP
201: KQLKKLSTYF NAAYFAFSVG ELVALTILVW VQTHSGMDAG FGVSAAVMTM GLISLICGTL YYRNKPPQGS IFIPVAQVFV AAILKRKQIC PSNPQMLHGS
301: QSNVARKHTN KFRFLDKACI RVQQGTGSSS NDTKESPWIL CSVAQVEQAK ILLSVIPIFA STIVFNTILA QLQTFSVQQG SSMDTHLTKS FHVPPASLQS
401: IPYILLIVVV PLYDSFFVPF ARKITGHESG ISPLQRIGFG LFLATFSMIS AALVEKKRRD AAVNLNETIS IFWITPQFLI FGLSEMFTAV GLIEFFYKQS
501: LKGMQTFFTA ITYCSYSFGF YLSSLLVSMV NNISSSSSTG GWLHDNDLNK DKLDFFYWLL AALSFLNFLN YLFWSRWYSY KPSQSQGDTN ANESINLFGH
601: SSKNYSGDDN IP

Best Arabidopsis Sequence Match ( AT1G59740.1 )
(BLAST)

001: MAEINKQSNK WEQEEVSNEN NWELAEEESV DWRGRPSNPN KHGGMRAALF VLGLQAFEIM GIAAVGNNLI TYVINEMHFP LSKAANIVTN FVGTIFIFAL
101: LGGYLSDAFL GSFWTIIIFG FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN MIAHGADQFS QSHPKQSKRL
201: SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND
301: VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM
401: LIFLVPLYDS FLVPFARKLT GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE MFTAVGLIEF FYKQSAKGME
501: SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I

Arabidopsis Description

NPF4.3Protein NRT1/ PTR FAMILY 4.3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VV5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.