Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035429.1-P | Field mustard | plasma membrane | 91.03 | 90.57 |
| Bra027836.1-P | Field mustard | plasma membrane | 91.2 | 89.39 |
| CDY65523 | Canola | plastid | 48.9 | 89.2 |
| CDY45893 | Canola | golgi, peroxisome, plasma membrane | 71.57 | 88.68 |
| CDY45147 | Canola | mitochondrion | 49.07 | 87.35 |
| CDY67653 | Canola | peroxisome | 51.27 | 83.47 |
| CDY70795 | Canola | plasma membrane | 44.33 | 82.91 |
| KRH51284 | Soybean | plasma membrane | 69.2 | 72.13 |
| PGSC0003DMT400053373 | Potato | cytosol, peroxisome, plasma membrane | 72.93 | 71.24 |
| Solyc01g103030.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 72.76 | 70.96 |
| KRH01875 | Soybean | plasma membrane | 64.3 | 70.5 |
| VIT_12s0035g01820.t01 | Wine grape | golgi, peroxisome, plasma membrane | 71.91 | 69.67 |
| KRH26263 | Soybean | cytosol, peroxisome, plasma membrane | 71.4 | 68.95 |
| AT1G33440.1 | Thale cress | plasma membrane | 64.81 | 63.73 |
| TraesCS2A01G309100.1 | Wheat | plasma membrane | 61.93 | 63.1 |
| TraesCS2B01G326200.1 | Wheat | plasma membrane | 61.93 | 63.1 |
| TraesCS2D01G307400.1 | Wheat | plasma membrane | 62.1 | 63.06 |
| EES12219 | Sorghum | plasma membrane | 60.74 | 60.95 |
| Zm00001d003603_P001 | Maize | plasma membrane | 60.58 | 60.68 |
| Os04t0441800-01 | Rice | plasma membrane | 62.27 | 60.23 |
| KXG24751 | Sorghum | peroxisome, plasma membrane, vacuole | 55.16 | 54.15 |
| Zm00001d049349_P001 | Maize | mitochondrion | 53.98 | 44.49 |
| HORVU2Hr1G076880.23 | Barley | golgi, peroxisome | 38.92 | 39.18 |
| AT3G25260.1 | Thale cress | plasma membrane | 33.5 | 38.45 |
| AT1G69850.1 | Thale cress | plasma membrane | 37.73 | 38.12 |
| AT3G25280.1 | Thale cress | plasma membrane | 33.5 | 38.0 |
| AT1G27040.1 | Thale cress | plasma membrane | 35.53 | 37.04 |
| AT2G26690.1 | Thale cress | plasma membrane | 35.87 | 36.74 |
| AT1G12110.1 | Thale cress | plasma membrane | 35.7 | 35.76 |
| AT5G62730.1 | Thale cress | plasma membrane | 35.36 | 35.48 |
| AT3G21670.1 | Thale cress | plasma membrane | 35.03 | 35.08 |
| AT5G13400.1 | Thale cress | plasma membrane | 31.81 | 30.13 |
Protein Annotations
| MapMan:24.2.2.9 | EntrezGene:842267 | ProteinID:AAD39317.1 | ProteinID:AEE33611.1 | ArrayExpress:AT1G59740 | EnsemblPlantsGene:AT1G59740 |
| RefSeq:AT1G59740 | TAIR:AT1G59740 | RefSeq:AT1G59740-TAIR-G | EnsemblPlants:AT1G59740.1 | TAIR:AT1G59740.1 | EMBL:AY035037 |
| EMBL:AY051041 | Unigene:At.11372 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006857 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009624 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_trans_sf | RefSeq:NP_176183.1 | PFAM:PF00854 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | InterPro:POT_fam | ScanProsite:PS01022 |
| PANTHER:PTHR11654 | PANTHER:PTHR11654:SF187 | InterPro:PTR2_symporter_CS | UniProt:Q93VV5 | SUPFAM:SSF103473 | TMHMM:TMhelix |
| UniParc:UPI00000483BA | SEG:seg | : | : | : | : |
Description
NPF4.3Protein NRT1/ PTR FAMILY 4.3 [Source:UniProtKB/Swiss-Prot;Acc:Q93VV5]
Coordinates
chr1:+:21967986..21972503
Molecular Weight (calculated)
66045.6 Da
IEP (calculated)
9.332
GRAVY (calculated)
0.237
Length
591 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEINKQSNK WEQEEVSNEN NWELAEEESV DWRGRPSNPN KHGGMRAALF VLGLQAFEIM GIAAVGNNLI TYVINEMHFP LSKAANIVTN FVGTIFIFAL
101: LGGYLSDAFL GSFWTIIIFG FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN MIAHGADQFS QSHPKQSKRL
201: SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND
301: VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM
401: LIFLVPLYDS FLVPFARKLT GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE MFTAVGLIEF FYKQSAKGME
501: SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I
101: LGGYLSDAFL GSFWTIIIFG FVELSGFILL SVQAHLPQLK PPKCNPLIDQ TCEEAKGFKA MIFFMALYLV ALGSGCVKPN MIAHGADQFS QSHPKQSKRL
201: SSYFNAAYFA FSMGELIALT LLVWVQTHSG MDIGFGVSAA AMTMGIISLV SGTMYFRNKR PRRSIFTPIA HVIVAAILKR KLASPSDPRM LHGDHHVAND
301: VVPSSTLPHT PRFRFLDKAC IKIQDTNTKE SPWRLCTVTQ VEQVKTLISL VPIFASTIVF NTILAQLQTF SVQQGSSMNT RLSNSFHIPP ASLQAIPYIM
401: LIFLVPLYDS FLVPFARKLT GHNSGIPPLT RIGIGLFLST FSMVSAAMLE KKRRDSSVLD GRILSIFWIT PQFLIFGISE MFTAVGLIEF FYKQSAKGME
501: SFLMALTYCS YSFGFYFSSV LVSVVNKITS TSVDSKGWLG ENDLNKDRLD LFYWLLAVLS LLNFLSYLFW SRWNIKSSRR NNTNVVGDEN I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.