Skip to main content
crop-pal logo
Barley
Search for another protein from :
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi

Predictor Summary:
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome
Any Predictor:golgi, peroxisome
MultiLoc:golgi
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70795 Canola plasma membrane 32.03 59.49
TraesCS2D01G307400.1 Wheat plasma membrane 53.32 53.78
TraesCS2A01G309100.1 Wheat plasma membrane 52.98 53.62
CDY67653 Canola peroxisome 33.05 53.44
TraesCS2B01G326200.1 Wheat plasma membrane 52.47 53.1
Os04t0441800-01 Rice plasma membrane 50.09 48.12
EES12219 Sorghum plasma membrane 47.87 47.71
Zm00001d003603_P001 Maize plasma membrane 47.53 47.29
HORVU4Hr1G015640.2 Barley golgi, peroxisome, plasma membrane 44.12 42.95
KRH51284 Soybean plasma membrane 41.23 42.68
KRH01875 Soybean plasma membrane 39.01 42.49
PGSC0003DMT400053373 Potato cytosol, peroxisome, plasma membrane 41.23 40.0
VIT_12s0035g01820.t01 Wine grape golgi, peroxisome, plasma membrane 41.4 39.84
Solyc01g103030.2.1 Tomato cytosol, peroxisome, plasma membrane 41.06 39.77
KRH26263 Soybean cytosol, peroxisome, plasma membrane 41.4 39.71
KXG24751 Sorghum peroxisome, plasma membrane, vacuole 40.37 39.37
AT1G59740.1 Thale cress plasma membrane 39.18 38.92
Bra035429.1-P Field mustard plasma membrane 39.18 38.72
Bra027836.1-P Field mustard plasma membrane 39.35 38.31
Zm00001d049349_P001 Maize mitochondrion 39.86 32.64
CDY45893 Canola golgi, peroxisome, plasma membrane 25.38 31.24
HORVU2Hr1G065480.1 Barley golgi, plasma membrane 11.41 29.78
HORVU3Hr1G071510.1 Barley golgi, plasma membrane 23.0 23.64
HORVU2Hr1G085260.3 Barley plasma membrane 20.61 23.59
HORVU2Hr1G062730.7 Barley plasma membrane 23.17 23.53
HORVU5Hr1G099170.6 Barley plasma membrane 23.68 22.79
HORVU5Hr1G095020.1 Barley plasma membrane 22.66 22.77
HORVU2Hr1G085210.21 Barley plasma membrane 21.12 22.1
HORVU7Hr1G086170.5 Barley cytosol, peroxisome, plastid 23.68 22.03
HORVU1Hr1G004720.4 Barley plasma membrane 21.64 22.01
HORVU7Hr1G071600.2 Barley mitochondrion 23.17 21.9
HORVU4Hr1G088020.4 Barley nucleus, plasma membrane 22.66 21.42
HORVU1Hr1G053990.4 Barley peroxisome 22.15 21.07
HORVU3Hr1G014510.3 Barley plastid 21.12 19.02
CDY65523 Canola plastid 8.35 15.12
HORVU2Hr1G098210.2 Barley mitochondrion, plasma membrane 7.67 14.66
HORVU1Hr1G054020.3 Barley mitochondrion, peroxisome, plastid 13.46 14.47
CDY45147 Canola mitochondrion 8.18 14.46
HORVU2Hr1G007730.1 Barley mitochondrion 6.98 11.65
HORVU2Hr1G081050.1 Barley endoplasmic reticulum, extracellular 0.85 7.25
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9UniProt:A0A287IIH8GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0009605GO:GO:0009607
GO:GO:0009624GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:HORVU2Hr1G076880
EnsemblPlants:HORVU2Hr1G076880.23InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF114
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000B474172SEG:seg::
Description
No Description!
Coordinates
chrchr2H:-:555433985..555437673
Molecular Weight (calculated)
63279.7 Da
IEP (calculated)
12.031
GRAVY (calculated)
-0.212
Length
587 amino acids
Sequence
(BLAST)
001: PRKQSTQAER KKPSMDVESF AAPHEVSVDW RGRPCEPGRH GGMRAAVFVL GIQAFEIMAI AAVGNNLITY VFGEMHFPLS EAANVVTNFV GTIFLLSLLG
101: GFLSDSYLGC FWTMLTFGFV ELSGFILLSV QAHLPQLKPP PCSMASMDGS CEQARGFKSS IFFVALYLVA LGSGCLKANM IAHGGDQFSG GADNAKSLST
201: YFNSAYFSFC LGELVALTAL VWVQTHSGMD VGFGISAAAM AAGLISLVSG AAFYRNKPPQ GSIFTPIARV FVAAFTKRKQ ICPTNPSNAG IGEPARLAGS
301: FRHGNKFRWS TAASTVLGQG VRQGRGAAAA AGGQHEAGEP VAAVHGVRGA AGQDPPGRDA HLRLHHRVQH RARAAADLLG AAGHRHGHRP RGHLPRPAGV
401: AAGHPLRHAP RARPGVRAPA RALHEEADGD ALRDHPAAAH RGRPRHRRLL HGRRRHRRAP APRPRGVRDA DARAVDRATV PRVRRVGDVH RRGAHRVLLQ
501: AGMRRHAVLP HGAHLLLLRL RLLPQLRAGD DGEQGDGEAR RRRLARRQRP QQGQAGPLLL DARRAQRAQL LLLPALRKVV QLGCRRL
Best Arabidopsis Sequence Match ( AT1G33440.1 )
(BLAST)
001: MDVHDLSEEA KRGVIHTSEE SLDDLCVDFR GRPCRPSKHG GTRAALFVLG FQAFEMMAIA AVGNNLITYV FNEMHFPLSK SANLVTNFIG TVFLLSLLGG
101: FLSDSYLGSF RTMLVFGVIE ISGFILLSVQ AHLPELRPPE CNMKSTTIHC VEANGYKAAT LYTALCLVAL GSGCLKPNII SHGANQFQRK DLRKLSSFFN
201: AAYFAFSMGQ LIALTLLVWV QTHSGMDVGF GVSAAVMAAG MISLVAGTSF YRNKPPSGSI FTPIAQVFVA AITKRKQICP SNPNMVHQPS TDLVRVKPLL
301: HSNKFRFLDK ACIKTQGKAM ESPWRLCTIE QVHQVKILLS VIPIFACTII FNTILAQLQT FSVQQGSSMN THITKTFQIP PASLQAIPYI ILIFFVPLYE
401: TFFVPLARKL TGNDSGISPL QRIGTGLFLA TFSMVAAALV EKKRRESFLE QNVMLSIFWI APQFLIFGLS EMFTAVGLVE FFYKQSSQSM QSFLTAMTYC
501: SYSFGFYLSS VLVSTVNRVT SSNGSGTKEG WLGDNDLNKD RLDHFYWLLA SLSFINFFNY LFWSRWYSCD PSATHHSAEV NSLEALENGE IKDSTTEKPR
601: I
Arabidopsis Description
NPF4.4Protein NRT1/ PTR FAMILY 4.4 [Source:UniProtKB/Swiss-Prot;Acc:Q56XQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.