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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
MultiLoc:cytosol
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU81850 Sorghum plasma membrane 50.1 46.73
HORVU2Hr1G085210.21 Barley plasma membrane 48.93 44.74
Os04t0491500-02 Rice plasma membrane 48.54 44.7
Os04t0491200-00 Rice plasma membrane, vacuole 48.73 38.17
HORVU5Hr1G095020.1 Barley plasma membrane 36.26 31.85
HORVU2Hr1G062730.7 Barley plasma membrane 35.28 31.31
HORVU2Hr1G065480.1 Barley golgi, plasma membrane 11.7 26.67
KRH51937 Soybean plasma membrane 26.51 23.78
PGSC0003DMT400030533 Potato plasma membrane 26.71 23.54
Solyc04g079510.1.1 Tomato plasma membrane 26.12 23.47
Solyc04g079520.2.1 Tomato plasma membrane 25.93 22.85
Solyc04g079530.2.1 Tomato plasma membrane 25.73 22.8
PGSC0003DMT400030534 Potato plasma membrane 25.93 22.73
KRH61236 Soybean plasma membrane 26.71 22.39
HORVU4Hr1G015640.2 Barley golgi, peroxisome, plasma membrane 25.34 21.56
KRH19434 Soybean plasma membrane 24.76 21.53
KRH02511 Soybean plasma membrane 24.76 21.38
KRG96656 Soybean plasma membrane 23.98 21.35
KRH68384 Soybean plasma membrane 24.17 21.31
HORVU7Hr1G086170.5 Barley cytosol, peroxisome, plastid 25.93 21.08
KRH33721 Soybean plasma membrane 24.76 21.03
KRG90426 Soybean plasma membrane 24.17 20.63
HORVU2Hr1G076880.23 Barley golgi, peroxisome 23.59 20.61
PGSC0003DMT400054593 Potato plasma membrane 24.56 20.52
Solyc10g039290.1.1 Tomato plasma membrane 22.61 20.28
Solyc01g102360.1.1 Tomato plasma membrane 23.78 20.03
PGSC0003DMT400011063 Potato cytosol 22.61 19.9
PGSC0003DMT400046950 Potato plasma membrane 23.59 19.8
HORVU3Hr1G071510.1 Barley golgi, plasma membrane 22.03 19.79
VIT_18s0001g11280.t01 Wine grape plastid 24.37 19.65
HORVU4Hr1G088020.4 Barley nucleus, plasma membrane 23.78 19.65
HORVU5Hr1G099170.6 Barley plasma membrane 23.0 19.34
HORVU7Hr1G071600.2 Barley mitochondrion 23.39 19.32
VIT_14s0060g00220.t01 Wine grape plasma membrane 23.2 19.26
HORVU1Hr1G053990.4 Barley peroxisome 23.0 19.12
HORVU2Hr1G007730.1 Barley mitochondrion 12.67 18.47
GSMUA_Achr11P... Banana plasma membrane 23.2 18.0
HORVU1Hr1G004720.4 Barley plasma membrane 19.69 17.5
HORVU3Hr1G014510.3 Barley plastid 21.83 17.18
PGSC0003DMT400030530 Potato mitochondrion 10.72 15.67
HORVU1Hr1G054020.3 Barley mitochondrion, peroxisome, plastid 14.04 13.19
HORVU2Hr1G098210.2 Barley mitochondrion, plasma membrane 7.8 13.03
HORVU2Hr1G081050.1 Barley endoplasmic reticulum, extracellular 0.97 7.25
Os04t0491350-00 Rice plasma membrane 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9UniProt:A0A287IR74GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:HORVU2Hr1G085260EnsemblPlants:HORVU2Hr1G085260.3InterPro:IPR020846InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854
InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF296SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000B46713C
SEG:seg:::::
Description
No Description!
Coordinates
chrchr2H:+:616726992..616730834
Molecular Weight (calculated)
56498.1 Da
IEP (calculated)
10.536
GRAVY (calculated)
-0.279
Length
513 amino acids
Sequence
(BLAST)
001: MTIGGSVDWR GNPIDREVHG GVRAAWFMYV ANVVMNMVIV PNLLNLVTYL HGTMHMGVSG SATTVTNLVG ATCGFALIGA FLSDSYIMRS RTILVFGPLM
101: FLGYGLLALQ AYLPSLHPAP CNIEADLSRC KEVHGRNATL LYAALYISAF GDGCIRTCMP SLGADQFDRQ DPTESRQQSS FFNWYTFGIS LGGFIGLILI
201: VWLENYKGWD IGLGACAILV LFGLLLVAAG LPFYRNQVPE GSPLTRILQV LVVALRNRNL ELPEKLEEAE ECRTGTGTGS AQVVPQRKSS STKLTSTTER
301: WGLVSLQRDE GGGDEDRAPR APSLLQLHGR IRIEHDRLHV HRAARWHDQH KSGQDPRLPG DALHHPHHIP ADNARRLRPV RRAVPAKAHG LRRRHHPSAA
401: HRHRLRLHDT RRGHRGGRRE KKEGGCSADV PVLARASVLP AWGGRRDVVH RTPGVLQQRG ATGHEVDRHG VVLVRARARV LDGHVPGGNR EQGHQARAAG
501: RLARGQELEQ QPS
Best Arabidopsis Sequence Match ( AT1G27040.1 )
(BLAST)
001: MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV
101: IFLISASIEF LGLILLTIQA RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP KGRKQRSTFF NYYVFCLSCG
201: ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC
301: LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK
401: SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG
501: YYLSSVMVPI VNRVTKSAGQ SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS
Arabidopsis Description
NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.