Factsheet for HORVU1Hr1G004720.4

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
MultiLoc:	plasma membrane
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G031300.1	Wheat	peroxisome	93.76	92.96
TraesCS1D01G032700.1	Wheat	peroxisome	93.59	92.78
TraesCS1B01G038700.1	Wheat	peroxisome	93.41	92.61
KXG32694	Sorghum	cytosol	83.19	81.77
Zm00001d044529_P001	Maize	cytosol, peroxisome, plasma membrane	82.5	80.54
Zm00001d009399_P001	Maize	cytosol, peroxisome, plasma membrane	81.28	79.36
Solyc07g032490.2.1	Tomato	plasma membrane	65.51	66.43
PGSC0003DMT400075163	Potato	plasma membrane	65.51	65.17
Solyc01g096880.2.1	Tomato	plasma membrane	64.64	64.98
PGSC0003DMT400070732	Potato	plasma membrane	64.64	64.87
VIT_11s0016g05170.t01	Wine grape	plasma membrane	64.64	64.76
GSMUA_Achr6P05170_001	Banana	plasma membrane	64.82	64.59
AT2G26690.1	Thale cress	plasma membrane	63.78	63.78
KRH03705	Soybean	plasma membrane	64.47	63.59
KRH20280	Soybean	plasma membrane	63.78	63.34
CDY45207	Canola	golgi, plasma membrane	63.26	62.18
Bra012052.1-P	Field mustard	plasma membrane	55.63	61.61
Solyc08g061020.1.1	Tomato	plasma membrane	31.72	61.0
CDX71495	Canola	plasma membrane	63.26	60.83
CDY30787	Canola	mitochondrion	63.08	60.57
PGSC0003DMT400053569	Potato	endoplasmic reticulum, plasma membrane	27.9	60.53
GSMUA_Achr7P08300_001	Banana	plasma membrane	67.07	57.5
GSMUA_Achr4P30700_001	Banana	plasma membrane	66.72	56.04
Solyc08g061010.2.1	Tomato	plasma membrane	25.65	55.64
VIT_11s0016g05180.t01	Wine grape	plasma membrane	53.21	52.48
HORVU7Hr1G071600.2	Barley	mitochondrion	54.59	50.72
HORVU4Hr1G088020.4	Barley	nucleus, plasma membrane	53.38	49.6
HORVU2Hr1G065480.1	Barley	golgi, plasma membrane	18.54	47.56
HORVU1Hr1G053990.4	Barley	peroxisome	50.43	47.16
HORVU5Hr1G099170.6	Barley	plasma membrane	48.53	45.9
HORVU1Hr1G054020.3	Barley	mitochondrion, peroxisome, plastid	36.4	38.46
HORVU2Hr1G081050.1	Barley	endoplasmic reticulum, extracellular	4.51	37.68
HORVU3Hr1G071510.1	Barley	golgi, plasma membrane	33.28	33.63
HORVU7Hr1G086170.5	Barley	cytosol, peroxisome, plastid	35.88	32.81
HORVU4Hr1G015640.2	Barley	golgi, peroxisome, plasma membrane	33.62	32.17
HORVU3Hr1G014510.3	Barley	plastid	35.7	31.6
HORVU2Hr1G062730.7	Barley	plasma membrane	30.16	30.1
HORVU5Hr1G095020.1	Barley	plasma membrane	30.16	29.79
HORVU2Hr1G085210.21	Barley	plasma membrane	28.77	29.59
HORVU2Hr1G098210.2	Barley	mitochondrion, plasma membrane	15.42	28.99
HORVU2Hr1G007730.1	Barley	mitochondrion	17.16	28.12
HORVU2Hr1G076880.23	Barley	golgi, peroxisome	22.01	21.64
HORVU2Hr1G085260.3	Barley	plasma membrane	17.5	19.69

Protein Annotations

MapMan:24.2.2.9	UniProt:A0A287EID0	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006857	GO:GO:0006950	GO:GO:0008150	GO:GO:0009611	GO:GO:0009719	GO:GO:0009753
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:HORVU1Hr1G004720	EnsemblPlants:HORVU1Hr1G004720.4
InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	ScanProsite:PS01022
PANTHER:PTHR11654	PANTHER:PTHR11654:SF85	InterPro:PTR2_symporter_CS	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000B465246
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:9795337..9797243

Molecular Weight (calculated)

62815.6 Da

IEP (calculated)

7.014

GRAVY (calculated)

0.336

Length

577 amino acids

Sequence
(BLAST)

001: MEIERSWSED GNLVQDAVDY RGCPADRSST GSWLGAASVV GIELCERLAT MGIAVNLVTY LTDTMHLPSA DSANVVTDFM GTSFLLCFLG GFLADAFLGR
101: YLTIAIFALV QALGTGLLAV STTVHQLRPP PSEEATGLQM GVLYMCLYLI ALGTGGLKSS VSGFGTDQFD ERDDRERAAM GYFFDRFFFF ISLGTLLAVT
201: FLVYIQDHVG RSWAYGLCSG AMLIAIAVFL SGTKRYRYKR SSGSPVVHIL QVLVAAARKR GLKQPHTAAA LYEDRPEHAR IHHTDQFRCL DSAAVMAGEE
301: DNEMGPDGRP TPNPWKLCSV SRVEEVKMVA RLMPVWATTI LFWTIYAQMI TFSVEQATTM DRRIGGFEIP AASLTVFFVG AIMLTLAVYD RVFIPLCRNL
401: TGRPGFTNLE KIGIGLVLSI AGMVAAAVTE KKRLTVASTA TTMNGTALPI TVFMLIPQFL LVGAGEAFIY TGQLDFFITR SPKGMKTMST GLFLTTLSLG
501: FFLSSALVSL VRGATTWLGD TINHSRLDYF YWLLAVLGAL NLAAYLLCAM WATPAAGSKA EQQPHPDEKS IRSGCPC

Best Arabidopsis Sequence Match ( AT2G26690.1 )
(BLAST)

001: MESKGSWTVA DAVDYKGRPA DKSKTGGWIT AALILGIEVV ERLSTMGIAV NLVTYLMETM HLPSSTSANI VTDFMGTSFL LCLLGGFLAD SFLGRFKTIG
101: IFSTIQALGT GALAVATKLP ELRPPTCHHG EACIPATAFQ MTILYVSLYL IALGTGGLKS SISGFGSDQF DDKDPKEKAH MAFFFNRFFF FISMGTLLAV
201: TVLVYMQDEV GRSWAYGICT VSMAIAIVIF LCGTKRYRYK KSQGSPVVQI FQVIAAAFRK RKMELPQSIV YLYEDNPEGI RIEHTDQFHL LDKAAIVAEG
301: DFEQTLDGVA IPNPWKLSSV TKVEEVKMMV RLLPIWATTI IFWTTYAQMI TFSVEQASTM RRNIGSFKIP AGSLTVFFVA AILITLAVYD RAIMPFWKKW
401: KGKPGFSSLQ RIAIGLVLST AGMAAAALVE QKRLSVAKSS SQKTLPISVF LLVPQFFLVG AGEAFIYTGQ LDFFITQSPK GMKTMSTGLF LTTLSLGFFV
501: SSFLVSIVKR VTSTSTDVGW LADNINHGRL DYFYWLLVIL SGINFVVYII CALWFKPTKG KDSVEKENGK GFSVEDC

Arabidopsis Description

NPF6.2Protein NRT1/ PTR FAMILY 6.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZY4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.