Factsheet for GSMUA_Achr7P08300_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 1
vacuole 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P05170_001	Banana	plasma membrane	65.97	76.68
VIT_11s0016g05170.t01	Wine grape	plasma membrane	63.89	74.65
KRH20280	Soybean	plasma membrane	63.74	73.84
Solyc07g032490.2.1	Tomato	plasma membrane	62.41	73.81
Solyc01g096880.2.1	Tomato	plasma membrane	62.7	73.52
KRH03705	Soybean	plasma membrane	63.89	73.5
PGSC0003DMT400070732	Potato	plasma membrane	62.7	73.39
PGSC0003DMT400075163	Potato	plasma membrane	62.26	72.24
AT2G26690.1	Thale cress	plasma membrane	60.62	70.71
GSMUA_Achr4P30700_001	Banana	plasma membrane	70.73	69.29
CDY45207	Canola	golgi, plasma membrane	59.73	68.48
Bra012052.1-P	Field mustard	plasma membrane	52.9	68.33
CDX71495	Canola	plasma membrane	60.62	68.0
HORVU1Hr1G004720.4	Barley	plasma membrane	57.5	67.07
TraesCS1A01G031300.1	Wheat	peroxisome	57.95	67.01
CDY30787	Canola	mitochondrion	59.73	66.89
TraesCS1B01G038700.1	Wheat	peroxisome	57.36	66.32
TraesCS1D01G032700.1	Wheat	peroxisome	57.06	65.98
Solyc08g061020.1.1	Tomato	plasma membrane	29.27	65.67
Zm00001d044529_P001	Maize	cytosol, peroxisome, plasma membrane	57.5	65.48
KXG32694	Sorghum	cytosol	56.76	65.08
Zm00001d009399_P001	Maize	cytosol, peroxisome, plasma membrane	55.42	63.11
Solyc08g061010.2.1	Tomato	plasma membrane	24.07	60.9
GSMUA_Achr11P...	Banana	plasma membrane	48.44	57.5
GSMUA_Achr8P11190_001	Banana	peroxisome	47.85	56.99
GSMUA_Achr8P11180_001	Banana	peroxisome	47.4	56.06
GSMUA_Achr1P20240_001	Banana	plasma membrane	48.89	55.48
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	48.14	55.48
GSMUA_Achr11P...	Banana	peroxisome	45.91	54.88
GSMUA_Achr6P36750_001	Banana	plasma membrane	49.18	50.08
GSMUA_Achr3P05990_001	Banana	cytosol, plasma membrane, plastid	40.86	47.91
GSMUA_Achr9P14440_001	Banana	plasma membrane	13.67	45.32
GSMUA_Achr5P16920_001	Banana	plasma membrane	30.31	36.62
GSMUA_Achr10P...	Banana	plasma membrane	30.31	36.17
GSMUA_Achr7P08880_001	Banana	plasma membrane	29.57	35.99
GSMUA_Achr8P08410_001	Banana	plasma membrane	30.76	35.14
GSMUA_Achr9P08330_001	Banana	plasma membrane	30.46	35.1
GSMUA_Achr6P07370_001	Banana	plasma membrane	29.12	35.0
GSMUA_AchrUn_...	Banana	plasma membrane	9.36	34.05
GSMUA_Achr2P16840_001	Banana	plasma membrane, plastid	30.46	34.0
GSMUA_Achr6P29080_001	Banana	plasma membrane	29.57	33.73
GSMUA_Achr6P00820_001	Banana	plasma membrane	30.31	32.28
GSMUA_Achr9P01100_001	Banana	cytosol, peroxisome, plasma membrane	28.38	32.1
GSMUA_Achr8P29280_001	Banana	plasma membrane	29.27	30.93
GSMUA_Achr11P...	Banana	plasma membrane	24.52	24.96

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006857	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
EnsemblPlantsGene:GSMUA_Achr7G08300_001	EnsemblPlants:GSMUA_Achr7P08300_001	EnsemblPlants:GSMUA_Achr7T08300_001	UniProt:M0TFS0	InterPro:MFS_trans_sf	PFAM:PF00854
InterPro:POT_fam	ScanProsite:PS01022	PANTHER:PTHR11654	PANTHER:PTHR11654:SF85	InterPro:PTR2_symporter_CS	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI0002968BE1	SEG:seg	:	:	:

Description

Nitrate transporter 1.1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G08300_001]

Coordinates

chr7:-:6205122..6207993

Molecular Weight (calculated)

74021.4 Da

IEP (calculated)

8.620

GRAVY (calculated)

0.443

Length

673 amino acids

Sequence
(BLAST)

001: MELQPIRCPH ICELRHLRES SSSSPCLVLH IQFLPVLLRL YEDQHGDRKA SWSVADAVDY KGLPADRSKT GGWAPAALIL VIEICERLST MGIAVNLVTY
101: LGGTMHIPSA ESANIVTDFM GTSFLLCLFG GFLADSFLGR YLTIAIFAMI QALGTGLLSI STKLPQLRPP PCNSTVTGQC QRANGFQMGA LYLSLYLIAV
201: GTGGLKSSVS GFGTDQFDEK DEKERSQMAY FFNRFFFFIS TGTLFACTVL VYIQDEVGRS WAYGICCISM VLALLVFLSG TRRYRYKKSS GSPIVHILQV
301: IVAAIRKRKL MLPSSVVFLY DDCPEASRIQ HTDQFRFLDK AAIVAEEDHE VKGETKQPNP WKMCSVTRIE EVKMMIRLLP IWATTFMFWT IYAQMITFSV
401: EQATTMERSI GSFQIPAGSL TAFFVAAILI TCAVYDRVIM PLMKKWKGKQ GFTSLQRIGI GLSFSIMGMA AAALTEVKRL SVAREAASGT TTLPISVFTL
501: IPQFLFVGAG EAFIYTGQLD FFITRSPKGM KTMSTGLFLT TLSLGFFLSS FLVSFVKGVT GGKGGQGWLA DNINYGRLDC FYGLLAGLST MNLGAFLVCA
601: GWSKPRSIGV AAKLLAVMSS CVVVDACFML VLLHVILLQL ADLNVCLDFM CLNTYGLQNI FGFITLINLR STS

Best Arabidopsis Sequence Match ( AT2G26690.1 )
(BLAST)

001: MESKGSWTVA DAVDYKGRPA DKSKTGGWIT AALILGIEVV ERLSTMGIAV NLVTYLMETM HLPSSTSANI VTDFMGTSFL LCLLGGFLAD SFLGRFKTIG
101: IFSTIQALGT GALAVATKLP ELRPPTCHHG EACIPATAFQ MTILYVSLYL IALGTGGLKS SISGFGSDQF DDKDPKEKAH MAFFFNRFFF FISMGTLLAV
201: TVLVYMQDEV GRSWAYGICT VSMAIAIVIF LCGTKRYRYK KSQGSPVVQI FQVIAAAFRK RKMELPQSIV YLYEDNPEGI RIEHTDQFHL LDKAAIVAEG
301: DFEQTLDGVA IPNPWKLSSV TKVEEVKMMV RLLPIWATTI IFWTTYAQMI TFSVEQASTM RRNIGSFKIP AGSLTVFFVA AILITLAVYD RAIMPFWKKW
401: KGKPGFSSLQ RIAIGLVLST AGMAAAALVE QKRLSVAKSS SQKTLPISVF LLVPQFFLVG AGEAFIYTGQ LDFFITQSPK GMKTMSTGLF LTTLSLGFFV
501: SSFLVSIVKR VTSTSTDVGW LADNINHGRL DYFYWLLVIL SGINFVVYII CALWFKPTKG KDSVEKENGK GFSVEDC

Arabidopsis Description

NPF6.2Protein NRT1/ PTR FAMILY 6.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZY4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.