Factsheet for GSMUA_Achr8P08410_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	plasma membrane	67.57	70.57
GSMUA_Achr6P07370_001	Banana	plasma membrane	66.21	69.64
GSMUA_Achr5P16920_001	Banana	plasma membrane	65.53	69.3
GSMUA_Achr9P08330_001	Banana	plasma membrane	68.25	68.84
GSMUA_Achr6P29080_001	Banana	plasma membrane	67.91	67.8
GSMUA_AchrUn_...	Banana	plasma membrane	21.22	67.57
CDY50182	Canola	plasma membrane	66.72	66.84
CDX93764	Canola	plasma membrane	67.91	66.67
Bra028002.1-P	Field mustard	peroxisome	67.74	66.5
Solyc11g042820.1.1	Tomato	peroxisome, plasma membrane, vacuole	66.89	66.44
AT1G33440.1	Thale cress	plasma membrane	67.4	66.06
PGSC0003DMT400082762	Potato	plasma membrane	49.92	65.04
GSMUA_Achr8P29280_001	Banana	plasma membrane	65.03	60.13
VIT_18s0089g01010.t01	Wine grape	plasma membrane	73.34	47.73
GSMUA_Achr7P08880_001	Banana	plasma membrane	36.16	38.52
GSMUA_Achr6P05170_001	Banana	plasma membrane	35.65	36.27
GSMUA_Achr2P16840_001	Banana	plasma membrane, plastid	37.01	36.15
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	34.97	35.27
GSMUA_Achr11P...	Banana	plasma membrane	33.79	35.1
GSMUA_Achr8P11190_001	Banana	peroxisome	33.28	34.69
GSMUA_Achr3P05990_001	Banana	cytosol, plasma membrane, plastid	33.11	33.97
GSMUA_Achr8P11180_001	Banana	peroxisome	32.77	33.92
GSMUA_Achr1P20240_001	Banana	plasma membrane	34.13	33.9
GSMUA_Achr6P00820_001	Banana	plasma membrane	36.33	33.86
GSMUA_Achr11P...	Banana	peroxisome	31.58	33.04
GSMUA_Achr9P14440_001	Banana	plasma membrane	11.21	32.51
GSMUA_Achr7P08300_001	Banana	plasma membrane	35.14	30.76
GSMUA_Achr6P36750_001	Banana	plasma membrane	33.79	30.11
GSMUA_Achr4P30700_001	Banana	plasma membrane	34.3	29.4
GSMUA_Achr11P...	Banana	plasma membrane	32.43	28.9
GSMUA_Achr9P01100_001	Banana	cytosol, peroxisome, plasma membrane	29.03	28.74

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr8G08410_001
EnsemblPlants:GSMUA_Achr8P08410_001	EnsemblPlants:GSMUA_Achr8T08410_001	UniProt:M0TNP4	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam
PANTHER:PTHR11654	PANTHER:PTHR11654:SF198	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0002957252	SEG:seg

Description

Putative Peptide transporter PTR1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G08410_001]

Coordinates

chr8:+:5616696..5618787

Molecular Weight (calculated)

65139.6 Da

IEP (calculated)

8.191

GRAVY (calculated)

0.356

Length

589 amino acids

Sequence
(BLAST)

001: MDAQARHSVG EESMHAVVFL DWKGRSCMPT KHGGMRAAAF LLGLQALEMM AIAAVGNNLI TYVFNDMHFP LSKSANIVTN FIGAVFLLSL LGGFLSDSYL
101: GSFRTMLAFG FVELSGFLLL TVQAHLPQLR PPHCNMMSEG GDRCVEAKGF EALVFYTALY LVALGSGCLK PNIISHGADQ FTKDDPNHSK KLSTYFNTAY
201: FSFCVGELIA LTVLVWVQTR SGMDVGFSLS AATMAAGLIS LICGMLYYRN KPPRGSLFTP IARVLVAAII KRKQVSPNTK LLRQGSVHTE KFRFLDKACM
301: QIQGVADRKQ SPWTLCTVAQ VEQVKIILSV IPIFACTIIF NTILAQLQTF SVQQGSAMNT QVTEAFEIPP ASLQAIPYLM LIVLVPLYEI GFVPLARRFT
401: KTDSGISSLQ RIGLGLFTVT FSMVSAALVE KKRRELAVGS DKQLSIFWIA PQFLIFGVSE MFTAVGLIEF FYEQSMAGMQ SFLTAMTYCS YSFGFYLSSL
501: LVSLVNKVSS GAHWSGWLSD NNLDKDRLDL FYWLLAALSL VNFVNYLYWS RWYSYNPSAD SAAINLPCAE EDYSSFTSSK LMEAQNIPL

Best Arabidopsis Sequence Match ( AT1G33440.1 )
(BLAST)

001: MDVHDLSEEA KRGVIHTSEE SLDDLCVDFR GRPCRPSKHG GTRAALFVLG FQAFEMMAIA AVGNNLITYV FNEMHFPLSK SANLVTNFIG TVFLLSLLGG
101: FLSDSYLGSF RTMLVFGVIE ISGFILLSVQ AHLPELRPPE CNMKSTTIHC VEANGYKAAT LYTALCLVAL GSGCLKPNII SHGANQFQRK DLRKLSSFFN
201: AAYFAFSMGQ LIALTLLVWV QTHSGMDVGF GVSAAVMAAG MISLVAGTSF YRNKPPSGSI FTPIAQVFVA AITKRKQICP SNPNMVHQPS TDLVRVKPLL
301: HSNKFRFLDK ACIKTQGKAM ESPWRLCTIE QVHQVKILLS VIPIFACTII FNTILAQLQT FSVQQGSSMN THITKTFQIP PASLQAIPYI ILIFFVPLYE
401: TFFVPLARKL TGNDSGISPL QRIGTGLFLA TFSMVAAALV EKKRRESFLE QNVMLSIFWI APQFLIFGLS EMFTAVGLVE FFYKQSSQSM QSFLTAMTYC
501: SYSFGFYLSS VLVSTVNRVT SSNGSGTKEG WLGDNDLNKD RLDHFYWLLA SLSFINFFNY LFWSRWYSCD PSATHHSAEV NSLEALENGE IKDSTTEKPR
601: I

Arabidopsis Description

NPF4.4Protein NRT1/ PTR FAMILY 4.4 [Source:UniProtKB/Swiss-Prot;Acc:Q56XQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.