Factsheet for GSMUA_Achr4P30700_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 2
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P05170_001	Banana	plasma membrane	68.12	80.83
VIT_11s0016g05170.t01	Wine grape	plasma membrane	62.15	74.13
Solyc07g032490.2.1	Tomato	plasma membrane	60.12	72.58
KRH20280	Soybean	plasma membrane	61.28	72.46
KRH03705	Soybean	plasma membrane	61.14	71.79
Solyc01g096880.2.1	Tomato	plasma membrane	59.97	71.78
PGSC0003DMT400075163	Potato	plasma membrane	60.55	71.72
PGSC0003DMT400070732	Potato	plasma membrane	59.39	70.96
GSMUA_Achr7P08300_001	Banana	plasma membrane	69.29	70.73
AT2G26690.1	Thale cress	plasma membrane	57.64	68.63
TraesCS1A01G031300.1	Wheat	peroxisome	57.35	67.7
TraesCS1B01G038700.1	Wheat	peroxisome	56.77	67.01
HORVU1Hr1G004720.4	Barley	plasma membrane	56.04	66.72
TraesCS1D01G032700.1	Wheat	peroxisome	56.33	66.49
KXG32694	Sorghum	cytosol	56.33	65.93
Bra012052.1-P	Field mustard	plasma membrane	49.93	65.83
Zm00001d044529_P001	Maize	cytosol, peroxisome, plasma membrane	56.48	65.65
CDY45207	Canola	golgi, plasma membrane	56.04	65.59
CDX71495	Canola	plasma membrane	56.48	64.67
Solyc08g061020.1.1	Tomato	plasma membrane	28.09	64.33
CDY30787	Canola	mitochondrion	56.04	64.06
Zm00001d009399_P001	Maize	cytosol, peroxisome, plasma membrane	55.02	63.96
Solyc08g061010.2.1	Tomato	plasma membrane	22.71	58.65
GSMUA_Achr8P11190_001	Banana	peroxisome	46.58	56.64
GSMUA_Achr8P11180_001	Banana	peroxisome	46.14	55.71
GSMUA_Achr11P...	Banana	plasma membrane	45.85	55.56
GSMUA_Achr11P...	Banana	peroxisome	44.69	54.53
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	46.29	54.45
GSMUA_Achr1P20240_001	Banana	plasma membrane	46.29	53.63
GSMUA_Achr6P36750_001	Banana	plasma membrane	47.16	49.02
GSMUA_Achr3P05990_001	Banana	cytosol, plasma membrane, plastid	40.9	48.95
GSMUA_Achr9P14440_001	Banana	plasma membrane	13.54	45.81
GSMUA_Achr10P...	Banana	plasma membrane	29.4	35.82
GSMUA_Achr5P16920_001	Banana	plasma membrane	28.97	35.73
GSMUA_Achr7P08880_001	Banana	plasma membrane	28.68	35.62
GSMUA_Achr2P16840_001	Banana	plasma membrane, plastid	30.86	35.16
GSMUA_Achr6P07370_001	Banana	plasma membrane	28.53	35.0
GSMUA_Achr8P08410_001	Banana	plasma membrane	29.4	34.3
GSMUA_Achr6P00820_001	Banana	plasma membrane	31.44	34.18
GSMUA_AchrUn_...	Banana	plasma membrane	9.17	34.05
GSMUA_Achr9P08330_001	Banana	plasma membrane	28.68	33.73
GSMUA_Achr6P29080_001	Banana	plasma membrane	28.68	33.39
GSMUA_Achr9P01100_001	Banana	cytosol, peroxisome, plasma membrane	27.51	31.76
GSMUA_Achr8P29280_001	Banana	plasma membrane	28.24	30.46
GSMUA_Achr11P...	Banana	plasma membrane	23.87	24.81

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006857	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
EnsemblPlantsGene:GSMUA_Achr4G30700_001	EnsemblPlants:GSMUA_Achr4P30700_001	EnsemblPlants:GSMUA_Achr4T30700_001	UniProt:M0STI2	InterPro:MFS_trans_sf	PFAM:PF00854
InterPro:POT_fam	ScanProsite:PS01022	PANTHER:PTHR11654	PANTHER:PTHR11654:SF85	InterPro:PTR2_symporter_CS	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI000294834D	SEG:seg	:	:	:

Description

Nitrate transporter 1.1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G30700_001]

Coordinates

chr4:-:28179805..28187691

Molecular Weight (calculated)

74885.9 Da

IEP (calculated)

8.405

GRAVY (calculated)

0.371

Length

687 amino acids

Sequence
(BLAST)

001: MPRLLAGLQI RLDELSFPCA DAGLPKGCEN LDLLPSAELM LNFFAGLSML RETLVALPPW AVAEAKLHHL RFINDASRGR GTWLTSCECL VCSSGLAETN
101: MEGKMSPAVA DAVDYKGFPA DRSVTGGWVP AALILVIEIC ERLSTMGIAV NLVTYLGGTM HLPSAESANV VSDFLGASFL LCLLGGFLAD SFLGRYLTVA
201: IFALVQALGT GMLTVSTSLP RLRPPPCNTS ATNRCRRASG FQMGILYLSL YLIALGTGGL KSSVSGFGTD QFDDKDEKEK SQMAYFFNRF FFFISIGSLL
301: AVTVLVYIQD EVGRSWAYGI CCISMLLAVI LFLSGTKRYR YKKSSGSPIV HILQVIVAAF SKRQLKYPAT IAFLYEDSPE ISRIQHTDQF HFLDKAAIMA
401: EGDSDVHGET STVNRWRLCS VTRIEEVKMM IRLLPVWATT IMFWTVYAQI ITFSVEQATT MERSIGSFQI PAGSLTVFFV GAIMVTLGIY DRAIMPLMKK
501: WKGKQGFTNL QRIGIGLAFS IIGMAAAAVA EAKRLSVARR AGEGAALRGA TLPISVFTLI PQFFLVGAGE AFLYTGQLDF FITRSPKGMK TMSTGLFLTT
601: LSFGFFLSSF MVSVVRDVTG GKNGQGWLAD NINYGRLDYF YGLLAALSTL NMGAFLVCAM WIKQENPNQG LQMGSAALKS SSMEDTC

Best Arabidopsis Sequence Match ( AT2G26690.1 )
(BLAST)

001: MESKGSWTVA DAVDYKGRPA DKSKTGGWIT AALILGIEVV ERLSTMGIAV NLVTYLMETM HLPSSTSANI VTDFMGTSFL LCLLGGFLAD SFLGRFKTIG
101: IFSTIQALGT GALAVATKLP ELRPPTCHHG EACIPATAFQ MTILYVSLYL IALGTGGLKS SISGFGSDQF DDKDPKEKAH MAFFFNRFFF FISMGTLLAV
201: TVLVYMQDEV GRSWAYGICT VSMAIAIVIF LCGTKRYRYK KSQGSPVVQI FQVIAAAFRK RKMELPQSIV YLYEDNPEGI RIEHTDQFHL LDKAAIVAEG
301: DFEQTLDGVA IPNPWKLSSV TKVEEVKMMV RLLPIWATTI IFWTTYAQMI TFSVEQASTM RRNIGSFKIP AGSLTVFFVA AILITLAVYD RAIMPFWKKW
401: KGKPGFSSLQ RIAIGLVLST AGMAAAALVE QKRLSVAKSS SQKTLPISVF LLVPQFFLVG AGEAFIYTGQ LDFFITQSPK GMKTMSTGLF LTTLSLGFFV
501: SSFLVSIVKR VTSTSTDVGW LADNINHGRL DYFYWLLVIL SGINFVVYII CALWFKPTKG KDSVEKENGK GFSVEDC

Arabidopsis Description

NPF6.2Protein NRT1/ PTR FAMILY 6.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZY4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.