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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • plastid 1
  • peroxisome 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:peroxisome
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr4P23000_001
GSMUA_Achr4P31540_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G12110.1 GSMUA_Achr4P23000_001 AT1G30270.1 19766570
AT1G12110.1 GSMUA_Achr4P31540_001 AT1G30270.1 19766570
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P11180_001 Banana peroxisome 85.84 85.24
GSMUA_Achr11P... Banana plasma membrane 85.49 85.19
GSMUA_Achr11P... Banana peroxisome 76.28 76.55
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 73.98 71.58
GSMUA_Achr1P20240_001 Banana plasma membrane 74.87 71.33
PGSC0003DMT400012226 Potato cytosol, peroxisome, plasma membrane 70.8 67.8
Solyc08g078950.2.1 Tomato cytosol, peroxisome, plasma membrane 70.09 67.12
Zm00001d027285_P001 Maize cytosol, plasma membrane, vacuole 70.09 66.0
GSMUA_Achr6P36750_001 Banana plasma membrane 76.99 65.81
TraesCS4D01G361500.1 Wheat peroxisome 70.27 65.51
OQU93471 Sorghum plasma membrane 70.09 65.45
TraesCS5A01G537100.1 Wheat peroxisome 70.44 65.35
CDY30051 Canola cytosol, peroxisome, plasma membrane 40.35 65.33
Solyc08g007430.1.1 Tomato cytosol, peroxisome, plasma membrane 68.14 65.25
Os10t0554200-02 Rice plasma membrane 68.67 65.1
PGSC0003DMT400032493 Potato cytosol, peroxisome, plasma membrane 67.96 65.08
Os03t0103000-01 Rice cytosol, peroxisome, plasma membrane 67.79 65.03
Zm00001d029933_P001 Maize cytosol, peroxisome, plasma membrane 67.61 64.97
TraesCS4B01G375800.1 Wheat plasma membrane 69.73 64.91
Zm00001d029932_P001 Maize plasma membrane 68.32 64.87
EER91957 Sorghum plasma membrane 68.32 64.87
TraesCS4B01G371000.1 Wheat peroxisome 69.03 64.68
KRH04097 Soybean peroxisome 67.79 64.48
TraesCS1B01G224900.1 Wheat plasma membrane 67.96 64.43
TraesCS1D01G214200.1 Wheat plasma membrane 67.96 64.43
TraesCS1A01G211000.1 Wheat cytosol 67.79 64.37
TraesCS1B01G225000.1 Wheat plasma membrane 67.79 64.37
TraesCS1D01G214300.1 Wheat plasma membrane 67.79 64.37
Bra019744.1-P Field mustard plasma membrane 30.44 64.18
CDY69100 Canola plasma membrane 37.7 64.16
HORVU4Hr1G088020.4 Barley nucleus, plasma membrane 70.09 63.77
VIT_02s0154g00260.t01 Wine grape plastid 71.68 62.89
KRH28055 Soybean plasma membrane 65.13 62.8
HORVU1Hr1G053990.4 Barley peroxisome 68.32 62.56
KRH77380 Soybean cytosol, plasma membrane, plastid 64.78 62.46
TraesCS1A01G210900.1 Wheat plasma membrane 53.27 62.32
Solyc06g060620.2.1 Tomato plasma membrane 64.25 61.32
KRH57369 Soybean plasma membrane 63.72 61.02
PGSC0003DMT400035882 Potato plasma membrane 63.72 60.81
CDY21035 Canola plasma membrane 61.42 60.35
CDY31242 Canola plasma membrane 61.42 60.35
CDY15967 Canola plasma membrane 61.06 60.1
CDY26539 Canola plasma membrane 61.06 60.1
Bra016789.1-P Field mustard plasma membrane 62.3 59.66
AT1G12110.1 Thale cress plasma membrane 62.3 59.66
Bra026991.1-P Field mustard plasma membrane 61.77 59.25
GSMUA_Achr6P05170_001 Banana plasma membrane 56.99 55.61
GSMUA_Achr3P05990_001 Banana cytosol, plasma membrane, plastid 50.27 49.48
HORVU1Hr1G054020.3 Barley mitochondrion, peroxisome, plastid 47.79 49.45
GSMUA_Achr9P14440_001 Banana plasma membrane 17.7 49.26
GSMUA_Achr7P08300_001 Banana plasma membrane 56.99 47.85
GSMUA_Achr4P30700_001 Banana plasma membrane 56.64 46.58
GSMUA_Achr7P08880_001 Banana plasma membrane 34.51 35.26
GSMUA_Achr10P... Banana plasma membrane 33.98 34.04
GSMUA_Achr2P16840_001 Banana plasma membrane, plastid 36.11 33.83
GSMUA_Achr8P08410_001 Banana plasma membrane 34.69 33.28
GSMUA_Achr6P07370_001 Banana plasma membrane 32.39 32.68
GSMUA_Achr5P16920_001 Banana plasma membrane 32.04 32.5
GSMUA_Achr6P00820_001 Banana plasma membrane 36.28 32.44
GSMUA_Achr6P29080_001 Banana plasma membrane 33.1 31.69
GSMUA_Achr9P08330_001 Banana plasma membrane 32.74 31.68
GSMUA_Achr9P01100_001 Banana cytosol, peroxisome, plasma membrane 33.27 31.6
GSMUA_AchrUn_... Banana plasma membrane 10.09 30.81
GSMUA_Achr8P29280_001 Banana plasma membrane 30.8 27.32
GSMUA_Achr11P... Banana plasma membrane 27.61 23.6
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006857GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:GSMUA_Achr8G11190_001EnsemblPlants:GSMUA_Achr8P11190_001EnsemblPlants:GSMUA_Achr8T11190_001UniProt:M0TPH2InterPro:MFS_trans_sfPFAM:PF00854
InterPro:POT_famScanProsite:PS01022PANTHER:PTHR11654PANTHER:PTHR11654:SF142InterPro:PTR2_symporter_CSSUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI000296B3CDSEG:seg:::
Description
Nitrate transporter 1.1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G11190_001]
Coordinates
chr8:+:8090422..8093080
Molecular Weight (calculated)
60953.4 Da
IEP (calculated)
8.583
GRAVY (calculated)
0.373
Length
565 amino acids
Sequence
(BLAST)
001: MAVLPETGRE GETLSDAWDF KGRPAVKSQT GGWTCASMIL GVELCERLTT LGIAVNLVTY LTATMHLGSA ASANAVTNFL GTSFMLCLLG GFVADTFLGR
101: YLTIAIFTAV QASGVTILTI STAAPGLRPP ACADPLTGGC VRANGTQMGV LYLGLYLTAL GTGGLKSSVS GFGSDQFDEG DGAEKKQMLR FFSWFFFFIS
201: IGSLMAVTVL VYIQDNLGRR WGYGICAVAI VLGLAVFLSG TSRYRFKRLV GSPLTQIAAV VTGAWRKRSL DLPADPSMLH DVDAAGGDCT PGEKSSKKKK
301: KQKLPHTKEF RFLDRAAVVE GDTAVEQSKW RLSTLTDVEE VKQVIRMLPT WATTIMFWTV YAQMTTFSVS QATTMERRIG SSFEIPAGSL TVFFVGSILL
401: TRIAVGLALS ILAMCAAALT ERKRLAAAVV PLSVFWLIPQ FFLVGAGEAF TYIGQLDFFL RECPKGMKTM STGLFLSTLS LGFFLSSALV TIVHRVTGES
501: GKGAWLPDDL NKGKLYDFYW LLAALSVVNL VVFVVAARGY VYKEKRTADD GTHVVGLEDE VCCHA
Best Arabidopsis Sequence Match ( AT1G12110.1 )
(BLAST)
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.