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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • peroxisome 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:peroxisome, plasma membrane
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G251800.1
TraesCS2B01G271700.1
TraesCS2D01G252600.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G12110.1 TraesCS2A01G251800.1 AT1G30270.1 19766570
AT1G12110.1 TraesCS2B01G271700.1 AT1G30270.1 19766570
AT1G12110.1 TraesCS2D01G252600.1 AT1G30270.1 19766570
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G361500.1 Wheat peroxisome 96.72 97.19
TraesCS4B01G375800.1 Wheat plasma membrane 95.73 96.05
TraesCS4B01G371000.1 Wheat peroxisome 94.09 95.02
HORVU4Hr1G088020.4 Barley nucleus, plasma membrane 94.25 92.43
OQU93471 Sorghum plasma membrane 77.34 77.85
Zm00001d027285_P001 Maize cytosol, plasma membrane, vacuole 76.52 77.67
Os03t0103000-01 Rice cytosol, peroxisome, plasma membrane 71.43 73.85
TraesCS1A01G211000.1 Wheat cytosol 69.46 71.09
GSMUA_Achr8P11190_001 Banana peroxisome 65.35 70.44
TraesCS1A01G210900.1 Wheat plasma membrane 55.83 70.39
GSMUA_Achr8P11180_001 Banana peroxisome 65.19 69.77
GSMUA_Achr11P... Banana plasma membrane 64.37 69.14
TraesCS7A01G301700.1 Wheat plasma membrane 65.68 66.33
PGSC0003DMT400012226 Potato cytosol, peroxisome, plasma membrane 63.55 65.59
Solyc08g078950.2.1 Tomato cytosol, peroxisome, plasma membrane 63.38 65.42
GSMUA_Achr11P... Banana peroxisome 60.1 65.01
CDY30051 Canola cytosol, peroxisome, plasma membrane 36.45 63.61
PGSC0003DMT400032493 Potato cytosol, peroxisome, plasma membrane 61.41 63.39
Solyc08g007430.1.1 Tomato cytosol, peroxisome, plasma membrane 61.25 63.22
KRH04097 Soybean peroxisome 61.08 62.63
CDY69100 Canola plasma membrane 33.99 62.35
Bra019744.1-P Field mustard plasma membrane 27.42 62.31
KRH28055 Soybean plasma membrane 58.95 61.26
VIT_02s0154g00260.t01 Wine grape plastid 64.7 61.18
AT1G12110.1 Thale cress plasma membrane 58.95 60.85
KRH77380 Soybean cytosol, plasma membrane, plastid 58.29 60.58
Solyc06g060620.2.1 Tomato plasma membrane 58.62 60.3
CDY15967 Canola plasma membrane 56.81 60.28
Bra026991.1-P Field mustard plasma membrane 57.96 59.93
KRH57369 Soybean plasma membrane 57.96 59.83
CDY26539 Canola plasma membrane 56.32 59.76
Bra016789.1-P Field mustard plasma membrane 57.8 59.66
CDY31242 Canola plasma membrane 56.16 59.48
CDY21035 Canola plasma membrane 56.16 59.48
PGSC0003DMT400035882 Potato plasma membrane 57.47 59.12
TraesCS1A01G031300.1 Wheat peroxisome 50.9 53.26
TraesCS5A01G409600.1 Wheat plasma membrane 47.45 48.65
TraesCS2A01G335800.1 Wheat mitochondrion 48.11 48.43
TraesCS7A01G365100.1 Wheat plasma membrane 36.12 37.48
TraesCS2A01G309100.1 Wheat plasma membrane 33.99 35.69
TraesCS4A01G225400.1 Wheat golgi, peroxisome, plasma membrane, plastid 35.3 35.48
TraesCS3A01G272600.1 Wheat plasma membrane 30.21 34.52
TraesCS2A01G350300.1 Wheat plasma membrane 29.06 33.33
TraesCS3A01G081100.3 Wheat cytosol, peroxisome, plasma membrane, plastid 34.32 33.23
TraesCS5A01G056100.1 Wheat plasma membrane 25.78 33.05
TraesCS2A01G350100.1 Wheat plasma membrane 29.06 31.66
TraesCS5A01G388000.1 Wheat plasma membrane 29.72 31.1
TraesCS5A01G056200.2 Wheat plasma membrane 28.57 30.96
TraesCS2A01G264500.1 Wheat plasma membrane 28.74 30.22
TraesCS2A01G350000.1 Wheat plasma membrane 22.82 25.69
Protein Annotations
EnsemblPlants:TraesCS5A01G537100.1EnsemblPlantsGene:TraesCS5A01G537100Gene3D:1.20.1250.20GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006857GO:GO:0008150GO:GO:0016020GO:GO:0022857GO:GO:0055085
InterPro:MFS_trans_sfInterPro:POT_famInterPro:PTR2_symporter_CSPANTHER:PTHR11654PANTHER:PTHR11654:SF142PFAM:PF00854
ScanProsite:PS01022SEG:segSUPFAM:SSF103473TMHMM:TMhelixMapMan:24.2.2.9:
Description
No Description!
Coordinates
chr5A:-:693632917..693642362
Molecular Weight (calculated)
65010.9 Da
IEP (calculated)
9.062
GRAVY (calculated)
0.318
Length
609 amino acids
Sequence
(BLAST)
001: MAPLPETTAE ATLAAADDSG DSEALGDAWD YRGRPAVRGS SGGWSSAAMI LGVELNERLT TLGIAVNLVT YLTATMHLGN AASANAVTNF LGTSFLLCLL
101: GGFVADTYLG RYLTIAISTA VQAAGMTILT VSTAAPGLRP PPCKDPTGDG RVPGCAPPTG TQLGVLYLGL YLTALGTGGL KSSVSGFGSD QFDESHAGER
201: RRMARFFGWF FFFISLGSLL AVTVLVYVQD NVGRRWGYGA CVVAILAGLG VFLAGTPRYR FKKLAGSPLT QIAAVTAAAW RKRALPLPSD PSSLYDVDDA
301: AAAGEDVGGK RKLPHSKQCR FLDQAAIVEV ELEPSSPSSG KKKRKKWAVC TVTEVEEVKQ VVRMLPTWAT TIVFWTVYAQ MTTFSVSQAQ ALDRRLGPSF
401: VIPAGSLTVF FVGSILLTVP IYDRLIAPLA RRLTGNPQGL SPLQRIFVGL FLSILAMAVA GLTERHRLSA STAGIQLSVF LIVPQFLLVG AGEAFTYIGQ
501: LDFFLRECPR DMKTMSTGLF LTTLSLGFFL SSGLVSVVHA VTTSGGRRPW LANDIDKGRL DYFYWLLAAI STANLGIFVA AAKGYVYKEK RLADAGFIEL
601: HVEEVAVHA
Best Arabidopsis Sequence Match ( AT1G12110.1 )
(BLAST)
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.