Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • plasma membrane 4
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
EpiLoc:plastid
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane, vacuole
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra010783.1-P
Bra032374.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G12110.1 Bra010783.1-P AT1G30270.1 19766570
AT1G12110.1 Bra032374.1-P AT1G30270.1 19766570
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69100 Canola plasma membrane 91.42 73.8
CDY30051 Canola cytosol, peroxisome, plasma membrane 89.55 68.77
Bra016789.1-P Field mustard plasma membrane 90.3 41.02
AT1G12110.1 Thale cress plasma membrane 89.55 40.68
Bra026991.1-P Field mustard plasma membrane 88.06 40.07
Bra012431.1-P Field mustard plasma membrane 34.33 36.08
Solyc08g078950.2.1 Tomato cytosol, peroxisome, plasma membrane 68.28 31.02
GSMUA_Achr11P... Banana plasma membrane 65.3 30.86
PGSC0003DMT400012226 Potato cytosol, peroxisome, plasma membrane 67.54 30.68
GSMUA_Achr8P11180_001 Banana peroxisome 64.93 30.58
GSMUA_Achr1P20240_001 Banana plasma membrane 67.54 30.52
GSMUA_Achr8P11190_001 Banana peroxisome 64.18 30.44
PGSC0003DMT400032493 Potato cytosol, peroxisome, plasma membrane 66.42 30.17
Solyc08g007430.1.1 Tomato cytosol, peroxisome, plasma membrane 66.04 30.0
KRH28055 Soybean plasma membrane 64.55 29.52
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 64.18 29.45
KRH77380 Soybean cytosol, plasma membrane, plastid 64.18 29.35
EES13374 Sorghum plasma membrane 65.3 29.12
TraesCS7B01G201900.1 Wheat plasma membrane 65.3 29.02
TraesCS7D01G297000.1 Wheat plasma membrane 65.3 29.02
TraesCS7A01G301700.1 Wheat plasma membrane 64.93 28.86
Zm00001d024587_P001 Maize plasma membrane 65.3 28.78
GSMUA_Achr11P... Banana peroxisome 60.07 28.6
Os10t0554200-02 Rice plasma membrane 63.43 28.52
EER91957 Sorghum plasma membrane 62.69 28.24
Zm00001d029932_P001 Maize plasma membrane 62.69 28.24
HORVU7Hr1G071600.2 Barley mitochondrion 65.3 28.18
VIT_02s0154g00260.t01 Wine grape plastid 66.79 27.8
TraesCS1B01G225000.1 Wheat plasma membrane 61.57 27.73
Zm00001d029933_P001 Maize cytosol, peroxisome, plasma membrane 60.82 27.72
Zm00001d027285_P001 Maize cytosol, plasma membrane, vacuole 61.94 27.67
TraesCS4D01G361500.1 Wheat peroxisome 62.31 27.56
TraesCS5A01G537100.1 Wheat peroxisome 62.31 27.42
TraesCS1A01G211000.1 Wheat cytosol 60.82 27.39
TraesCS1D01G214300.1 Wheat plasma membrane 60.82 27.39
GSMUA_Achr6P36750_001 Banana plasma membrane 67.54 27.38
TraesCS1B01G224900.1 Wheat plasma membrane 60.82 27.35
Os03t0103000-01 Rice cytosol, peroxisome, plasma membrane 60.07 27.33
OQU93471 Sorghum plasma membrane 61.57 27.27
PGSC0003DMT400035882 Potato plasma membrane 60.07 27.2
Solyc06g060620.2.1 Tomato plasma membrane 60.07 27.2
TraesCS4B01G375800.1 Wheat plasma membrane 61.57 27.18
TraesCS1D01G214200.1 Wheat plasma membrane 60.45 27.18
TraesCS4B01G371000.1 Wheat peroxisome 60.82 27.03
KRH04097 Soybean peroxisome 58.96 26.6
HORVU1Hr1G053990.4 Barley peroxisome 60.82 26.42
HORVU4Hr1G088020.4 Barley nucleus, plasma membrane 61.19 26.41
Os08t0155400-01 Rice plasma membrane 50.37 25.71
KRH57369 Soybean plasma membrane 55.97 25.42
Bra023868.1-P Field mustard plasma membrane 50.0 23.18
Bra031295.1-P Field mustard plasma membrane 48.88 22.43
Bra012052.1-P Field mustard plasma membrane 38.81 19.96
TraesCS1A01G210900.1 Wheat plasma membrane 35.82 19.88
Bra011937.1-P Field mustard plasma membrane 36.19 18.73
Bra013221.1-P Field mustard plasma membrane 35.07 18.22
Bra013222.1-P Field mustard plasma membrane 34.7 18.06
Bra010117.1-P Field mustard plasma membrane 33.21 16.04
Bra028002.1-P Field mustard peroxisome 35.82 16.0
Bra027836.1-P Field mustard plasma membrane 35.45 15.75
Bra035429.1-P Field mustard plasma membrane 34.7 15.66
Bra023408.1-P Field mustard plastid 35.82 15.43
HORVU1Hr1G054020.3 Barley mitochondrion, peroxisome, plastid 27.99 13.74
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9EnsemblPlantsGene:Bra019744EnsemblPlants:Bra019744.1EnsemblPlants:Bra019744.1-PGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006857GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085UniProt:M4DTA1InterPro:MFS_trans_sfPFAM:PF00854
InterPro:POT_famScanProsite:PS01022ScanProsite:PS01023PANTHER:PTHR11654PANTHER:PTHR11654:SF78InterPro:PTR2_symporter_CS
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000253ED6ESEG:seg::
Description
AT1G12110 (E=2e-102) NRT1.1, CHL1-1, NRT1, B-1, ATNRT1, CHL1 | NRT1.1; nitrate transmembrane transporter/ transporter
Coordinates
chrA06:-:4664524..4665759
Molecular Weight (calculated)
29107.6 Da
IEP (calculated)
9.739
GRAVY (calculated)
0.369
Length
268 amino acids
Sequence
(BLAST)
001: MSLPETKSQT LLDAWDFQGR PADRSKTGGW TSAAMILLTY LTETMHLGNA TAANTVTNFL GTSFMLCLLG GFIADTFLGR YLTIAIFAAI QATGVSILTL
101: STIIPGLQPP RCNPTTSSHC VQASGIQLTV LYLALYLTVL GTGGVKASVS GFGSDQFDKT EPKEQSQMTY FFNRFFFCIN VGSLLAVTVL VYMQDDVGRK
201: WGYGLCAFSI VLALSIFLTG TNRYRFKKLI GSPMTQVAAV IVAAWRNRQA RVAVGPVVSI RLGRCYRS
Best Arabidopsis Sequence Match ( AT1G12110.1 )
(BLAST)
001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH
Arabidopsis Description
NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.