Factsheet for Bra013222.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52284	Canola	plasma membrane	99.03	99.03
Bra013221.1-P	Field mustard	plasma membrane	92.04	91.86
AT3G25260.1	Thale cress	plasma membrane	79.81	79.81
Bra011937.1-P	Field mustard	plasma membrane	64.47	64.09
Bra012431.1-P	Field mustard	plasma membrane	20.0	40.39
Bra010117.1-P	Field mustard	plasma membrane	39.81	36.94
Bra019744.1-P	Field mustard	plasma membrane	18.06	34.7
Bra028002.1-P	Field mustard	peroxisome	36.7	31.5
Bra016789.1-P	Field mustard	plasma membrane	35.92	31.36
Bra027836.1-P	Field mustard	plasma membrane	36.7	31.34
Bra026991.1-P	Field mustard	plasma membrane	35.53	31.07
Bra035429.1-P	Field mustard	plasma membrane	35.53	30.81
Bra031295.1-P	Field mustard	plasma membrane	33.4	29.45
Bra023868.1-P	Field mustard	plasma membrane	32.82	29.24
Bra012052.1-P	Field mustard	plasma membrane	29.32	28.98
Bra023408.1-P	Field mustard	plastid	31.26	25.88

Protein Annotations

Gene3D:1.20.1250.20	MapMan:11.1.4.1	MapMan:24.2.2.9	EnsemblPlantsGene:Bra013222	EnsemblPlants:Bra013222.1	EnsemblPlants:Bra013222.1-P
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	UniProt:M4D9R2	InterPro:MFS_dom
InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF165	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI000254088E	SEG:seg	:	:	:

Description

AT3G25260 (E=4e-226) | proton-dependent oligopeptide transport (POT) family protein

Coordinates

chrA03:+:19778895..19781012

Molecular Weight (calculated)

57255.6 Da

IEP (calculated)

9.141

GRAVY (calculated)

0.309

Length

515 amino acids

Sequence
(BLAST)

001: MQNEMEEKFE DWRGKEAIPG KHGGIRAASI ACVVEIMENM VFLACSTNFI TYFTKSWHYS SAKASNMVTN FTGTSFLLTI FGGFVADSFL TRFTAFVIFC
101: SIELLGLILL TIQAHSPKLQ PHGDNTPSTL PSLVLFTGLY AVATGVGGVK ASLPAHGGDQ LDSRKQGLIS GFFSWYFFSI CFGGLLAVTI MVWTEENKGW
201: SSSFDICTVI LASALFIFTV GFPMYRFRRP TGSPLTRIVN VFVSAARNRN RFVTDAEITL NNSTDKSIHH NKFKFLNKAK LNNKISATEV EETRTFLALL
301: PIFASTIVMN CCLAQLSTYS VQQGMLMNRK LSKSFELPPA SLNTIALLFM LSSIAFYELF AKRIASSNNE RSSSFNLKRI GTGLALTSIA MAIAAIVEAK
401: RKHEAVHNNI KISVFWLEFQ YVLLSFSDVL TLGGMLEFFY RESPASMKSI STALGWFSTA LGFFLSTVLV DVTKSVTGWL DGEDVNGSRL ELFYAVLCVL
501: NTLNLFNYIF WAKRY

Best Arabidopsis Sequence Match ( AT3G25260.1 )
(BLAST)

001: MQIEMEEKFE DWRGKEAISG KHGGIKAAFI ACVVETMENM VFLACSTNFM MYFTKSMNYS TPKAATMVTN FVGTSFLLTI FGGFVADSFL TRFAAFVLFG
101: SIELLGLIML TLQAHITKLQ PQGGKKPSTP QSTVLFTGLY AIAIGVGGVK GSLPAHGGDQ IGTRNQRLIS GFFNWYFFSV CLGGFLAVTL MVWIEENIGW
201: SSSFTISTAV LASAIFVFVA GCPMYRFKRP AGSPLTRIVN VFVSAARNRN RFVTDAEVVT QNHNSTDKSI HHNKFKFLNK AKLNNKISAT QVEETRTFLA
301: LLPIFGSTII MNCCVAQMGT FSVQQGMVTN RKLSRSFEIP VASLNAIPLL CMLSSLALYE LFGKRILSNS ERSSSFNLKR IGYGLALTSI SMAVAAIVEV
401: KRKHEAVHNN IKISVFWLEL QFVMLSLSDM LTVGGMLEFF FRESPASMRS MSTALGWCST AMGFFLSSVL VEVVNGITGW LRDDLNESRL ELFYLVLCVL
501: NTLNLFNYIF WAKRY

Arabidopsis Description

NPF4.1Protein NRT1/ PTR FAMILY 4.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSF0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.