Factsheet for Bra012431.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 4
vacuole 2
extracellular 1
golgi 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40277	Canola	plasma membrane	100.0	100.0
AT1G27040.1	Thale cress	plasma membrane	83.53	37.57
Bra019744.1-P	Field mustard	plasma membrane	36.08	34.33
Zm00001d036942_P001	Maize	plasma membrane	69.02	32.59
Os06t0581000-01	Rice	plasma membrane	72.16	31.19
TraesCS7A01G365100.1	Wheat	plasma membrane	70.59	30.66
Zm00001d046383_P001	Maize	plasma membrane	70.2	30.24
EER89980	Sorghum	plasma membrane	71.37	30.23
GSMUA_Achr7P08880_001	Banana	plasma membrane	63.92	29.48
TraesCS7D01G357300.2	Wheat	plasma membrane	70.59	29.13
Zm00001d036941_P001	Maize	plasma membrane	69.02	28.9
Bra010117.1-P	Field mustard	plasma membrane	62.35	28.65
HORVU7Hr1G086170.5	Barley	cytosol, peroxisome, plastid	69.8	28.21
GSMUA_Achr2P16840_001	Banana	plasma membrane, plastid	65.49	27.69
GSMUA_Achr6P00820_001	Banana	plasma membrane	65.49	26.42
TraesCS7B01G262200.1	Wheat	plasma membrane, plastid	70.98	26.23
Bra011937.1-P	Field mustard	plasma membrane	43.14	21.24
Bra013222.1-P	Field mustard	plasma membrane	40.39	20.0
Bra013221.1-P	Field mustard	plasma membrane	40.39	19.96
Bra023868.1-P	Field mustard	plasma membrane	40.0	17.65
Bra035429.1-P	Field mustard	plasma membrane	40.78	17.51
Bra028002.1-P	Field mustard	peroxisome	41.18	17.5
Bra027836.1-P	Field mustard	plasma membrane	41.18	17.41
Bra031295.1-P	Field mustard	plasma membrane	39.61	17.29
Bra016789.1-P	Field mustard	plasma membrane	39.61	17.12
Bra026991.1-P	Field mustard	plasma membrane	39.22	16.98
Bra012052.1-P	Field mustard	plasma membrane	27.84	13.63
Bra023408.1-P	Field mustard	plastid	29.02	11.9

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	EnsemblPlantsGene:Bra012431	EnsemblPlants:Bra012431.1	EnsemblPlants:Bra012431.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	UniProt:M4D7H1	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF00854	InterPro:POT_fam	PFscan:PS50850	PANTHER:PTHR11654	PANTHER:PTHR11654:SF98	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI0002540B8A	SEG:seg	:	:	:

Description

AT1G27040 (E=9e-094) | nitrate transporter, putative

Coordinates

chrA07:-:7716729..7718328

Molecular Weight (calculated)

27766.8 Da

IEP (calculated)

8.324

GRAVY (calculated)

0.472

Length

255 amino acids

Sequence
(BLAST)

001: MQGEDSKWEG YADWRNRAAV KGRHGGMLAA SFVLAVEVLE NLAFLANASN LVTYLTEFMH FSLSRAASEV SAFMGTAFLL ALLGGFFSDA FLSTFIVFII
101: SAFIEFMGLI LLTIQARRPS LMPPPCKSSP ASPCEPVHGS KAALLFVGLY LAALGIGGIK GSLPSHGAEQ FDESDPKGRK QRSTFFNYFV FCLSCGALVA
201: VTFVVWLEDN VGWEWGFGVS TISIFLSILV FLSGSRFYKN RIPRGSPLTT ILKVT

Best Arabidopsis Sequence Match ( AT1G27040.2 )
(BLAST)

001: MHGDVSKWEG YADWRNKAAL RGRHGGMLAA SFVLAVEILE NLAFLANASN LVLYLKNFMH MSLARSSSEV TTFMATAFLL ALLGGFLADA FFSTFVIFLI
101: SASIEFLGLI LLTIQARRPS LMPPPCKSSA ALRCEVVGGS KAAFLFVGLY LVSLGIGGIK GSLPSHGAEQ FDEGTPKGRK QRSTFFNYYV FCLSCGALVA
201: VTFVVWIEDN KGWEWGFGVS TISIFLSILV FLLGSRFYKN KIPRGSPLTT IFKVLLAASI VSCSSKTSSN HFTSREVQSE HEEKTPSQSL TNSLTCLNKA
301: IEGKTHHIWL ECTVQQVEDV KIVLKMLPIF GCTIMLNCCL AQLSTYSVHQ AATMNRKIVN FNVPSASLPV FPVVFMLILA PTYDHLIIPF ARKVTKSEIG
401: ITHLQRIGVG LVLSIVAMAV AALVELKRKQ VAREAGLLDS EETLPITFLW IALQYLFLGS ADLFTLAGLL EFFFTEAPSS MRSLATSLSW ASLALGYYLS
501: SVMVPIVNRV TKSAGQSPWL GEKLNRNRLD LFYWLMCVLS VVNFLHYLFW AKRYKYISTG SIS

Arabidopsis Description

NPF4.5Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.